RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 ZNF432O94892 652 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 LDOC1O95751 146 aaPredicted RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 SORDQ00796 357 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 ATXN7L3Q14CW9 347 aaPredicted RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 NR0B2Q15466 257 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 RAB11BQ15907 218 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 GFOD2Q3B7J2 385 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 SIGIRRQ6IA17 410 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 ZNF441Q8N8Z8 693 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 OR13C3Q8NGS6 347 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 RNF128Q8TEB7 428 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 UTP23Q9BRU9 249 aaKnown RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 SLC7A5P2Q9GIP4 190 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 RAB33BQ9H082 229 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 TXNIPQ9H3M7 391 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 POFUT1Q9H488 388 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 EXO5Q9H790 373 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 PTGES2Q9H7Z7 377 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 COPS7AQ9UBW8 275 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 FBXL2Q9UKC9 423 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 WIPF3A6NGB9 483 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 MS4A18H0YCH9 400 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 POLR2HP52434 150 aaKnown RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 DCAF7P61962 342 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 AANATQ16613 207 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 MS4A18Q3C1V0 323 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 FDX2Q6P4F2 183 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 SLC29A4Q7RTT9 530 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 RELL2Q8NC24 303 aaPredicted RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 LRRC20Q8TCA0 184 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 DAZLQ92904 295 aaKnown RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 SEC22AQ96IW7 307 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 RDH8Q9NYR8 311 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 VSX1Q9NZR4 365 aaPredicted RBP11.35□□□□□ -0.59
CLIC4-202ENST00000488683 AUP1Q9Y679 476 aa11.35□□□□□ -0.59
CLIC4-202ENST00000488683 A0A1W2PPL8 197 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 PLSCR5A0PG75 271 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 NUPL2O15504 423 aaKnown RBP11.34□□□□□ -0.59
CLIC4-202ENST00000488683 SPDEFO95238 335 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 MT-ATP6P00846 226 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 CPN1P15169 458 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 NXPH1P58417 271 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 HNRNPKP61978 463 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLIC4-202ENST00000488683 MFAP5Q13361 173 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 LCN10Q6JVE6 187 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 SLC18B1Q6NT16 456 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 TSSK4Q6SA08 328 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 SLC36A1Q7Z2H8 476 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 SPICQ8N5J4 248 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 SLC26A10Q8NG04 563 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 ANGPTL6Q8NI99 470 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 TNFAIP8L1Q8WVP5 186 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 ARL6Q9H0F7 186 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 LOC107986453A0A1B0GWG9 222 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 A0A1W2PNR3 127 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 OR2M5A3KFT3 312 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 A8MVM7 634 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 PHYHO14832 338 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 EFNA2O43921 213 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 PIAS2O75928 621 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 GNALP38405 381 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 MECP2P51608 486 aaKnown RBP11.34□□□□□ -0.59
CLIC4-202ENST00000488683 PNLIPRP2P54317 469 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 FAM74A1Q5RGS3 127 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 PXDC1Q5TGL8 231 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 FAM166AQ6J272 317 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 GPAT4Q86UL3 456 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 D2HGDHQ8N465 521 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 SLC25A28Q96A46 364 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 FGGYQ96C11 551 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 LINC00052Q96N35 136 aa11.34□□□□□ -0.59
CLIC4-202ENST00000488683 ZFHX4Q86UP3 3567 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 SLC17A2O00624 439 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 RAMP1O60894 148 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 NFYAP23511 347 aaPredicted RBP11.33□□□□□ -0.6
CLIC4-202ENST00000488683 PRSS3P35030 304 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 ARHGDIBP52566 201 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 RNF4P78317 190 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 ROM1Q03395 351 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 COL19A1Q14993 1142 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 TMEM65Q6PI78 240 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 PRR13Q9NZ81 148 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 TMEM269A0A1B0GVZ9 245 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 A0A1W2PPC1 479 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 CPED1A4D0V7 1026 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 MCRIP1C9JLW8 97 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 FTCDNL1E5RQL4 147 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 AMY2AP04746 511 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 SRFP11831 508 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 HTR2CP28335 458 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 DNASE1L1P49184 302 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 RIDAP52758 137 aaKnown RBP11.33□□□□□ -0.6
CLIC4-202ENST00000488683 EPHA4P54764 986 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 FOXF1Q12946 379 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 IKZF1Q13422 519 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 STEAP1BQ6NZ63 245 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 IDO2Q6ZQW0 420 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 GRINAQ7Z429 371 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms