RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 DNAJC21Q5F1R6 531 aaKnown RBP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 KLF17Q5JT82 389 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 FAM71F2Q6NXP2 309 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 C6orf89Q6UWU4 347 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 PNKDQ8N490 385 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 FTMTQ8N4E7 242 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 KIR3DL3Q8N743 410 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 FADS6Q8N9I5 356 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 OR10G3Q8NGC4 313 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 BRSK1Q8TDC3 778 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 LMX1AQ8TE12 382 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 PAQR8Q8TEZ7 354 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 C2orf15Q8WU43 125 aaKnown RBP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 SHC3Q92529 594 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 RDH5Q92781 318 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 FAM104AQ969W3 186 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 KCNA7Q96RP8 456 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 BBS2Q9BXC9 721 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 CALN1Q9BXU9 219 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 ROGDIQ9GZN7 287 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 ING2Q9H160 280 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 VCXQ9H320 206 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 PSTPIP2Q9H939 334 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 SLC39A1Q9NY26 324 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 ZNF223Q9UK11 482 aaPredicted RBP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 SCML1Q9UN30 329 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 AURKCQ9UQB9 309 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 OR10H1Q9Y4A9 318 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 PHF3Q92576 2039 aaKnown RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PLXNB1O43157 2135 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 YLPM1P49750 1951 aaKnown RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 IGLV4-60A0A075B6I1 120 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 A0A0U1RQS6 177 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 ARGFXA6NJG6 315 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 G3V4G9 280 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PRAMEF26H0Y7S4 382 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 GFYI3L273 518 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PES1O00541 588 aaKnown RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 RS1O15537 224 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 SNAI2O43623 268 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 OR10H3O60404 316 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 MED6O75586 246 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 CTAG2O75638 210 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 KIAA0754O94854 1291 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 AK1P00568 194 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PCCBP05166 539 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PLEKP08567 350 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 CRISP2P16562 243 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 F8A1P23610 371 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 CASP14P31944 242 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 CA7P43166 264 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 KIR2DS4P43632 304 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 CUL1Q13616 776 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 EBI3Q14213 229 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 BOLA3Q53S33 107 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 SAMD4BQ5PRF9 694 aaKnown RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 SDHAF4Q5VUM1 108 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 NIPA1Q7RTP0 329 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 C6orf120Q7Z4R8 191 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 CAMK2N1Q7Z7J9 78 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PLA2G4DQ86XP0 818 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 BBS7Q8IWZ6 715 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 C3orf56Q8N813 242 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 ATP6V0D2Q8N8Y2 350 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 SYT14Q8NB59 555 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 FDCSPQ8NFU4 85 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 MARCH1Q8TCQ1 289 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PIBF1Q8WXW3 757 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 RIT2Q99578 217 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 OMDQ99983 421 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 KLHDC3Q9BQ90 382 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PELOQ9BRX2 385 aaKnown RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 NUDT9Q9BW91 350 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 DPH5Q9H2P9 285 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 PATZ1Q9HBE1 687 aaKnown RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 C6orf203Q9P0P8 240 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-214ENST00000488427 RASD1Q9Y272 281 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 MUC4Q99102 2169 aa2.71□□□□□ -1.98
ITGB1-214ENST00000488427 EML6Q6ZMW3 1958 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 DNAJC13O75165 2243 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 RYR2Q92736 4967 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 ANKRD12Q6UB98 2062 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 IGLV4-69A0A075B6H9 119 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 IGHV1OR21-1A0A087WYE8 117 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 RBMY1BA6NDE4 496 aaKnown RBP2.7□□□□□ -1.98
ITGB1-214ENST00000488427 RBMY1EA6NEQ0 496 aaKnown RBP2.7□□□□□ -1.98
ITGB1-214ENST00000488427 CHMP2AO43633 222 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 CXCL13O43927 109 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 GIPP09681 153 aaPredicted RBP2.7□□□□□ -1.98
ITGB1-214ENST00000488427 CISD3P0C7P0 127 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 RBMY1DP0C7P1 496 aaKnown RBP2.7□□□□□ -1.98
ITGB1-214ENST00000488427 ICAM2P13598 275 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 HPGDP15428 266 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 CALCRP30988 508 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 SHMT2P34897 504 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 HPCAL1P37235 193 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 SMARCB1Q12824 385 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 GGTLC2Q14390 218 aa2.7□□□□□ -1.98
ITGB1-214ENST00000488427 MXD4Q14582 209 aaPredicted RBP2.7□□□□□ -1.98
ITGB1-214ENST00000488427 TMEM52BQ4KMG9 183 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms