RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PNPLA2Q96AD5 504 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 WDR77Q9BQA1 342 aaPredicted RBP23.38■■□□□ 1.33
HLA-C-208ENST00000487245 CKLFQ9UBR5 152 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 NPIPA1Q9UND3 350 aa23.38■■□□□ 1.33
HLA-C-208ENST00000487245 EXPH5Q8NEV8 1989 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 HMSDA8MTL9 139 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 SIGLEC6O43699 453 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 ZNF354AO60765 605 aaPredicted RBP23.37■■□□□ 1.33
HLA-C-208ENST00000487245 WNT11O96014 354 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 CXCL2P19875 107 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 MELKQ14680 651 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 ZNF385CQ66K41 422 aaPredicted RBP23.37■■□□□ 1.33
HLA-C-208ENST00000487245 OR5M10Q6IEU7 315 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 NDUFAF7Q7L592 441 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 CLEC1AQ8NC01 280 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 OR1J4Q8NGS1 313 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 THAP3Q8WTV1 239 aaPredicted RBP23.37■■□□□ 1.33
HLA-C-208ENST00000487245 NAT6Q93015 286 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 ALX4Q9H161 411 aaPredicted RBP23.37■■□□□ 1.33
HLA-C-208ENST00000487245 SCPEP1Q9HB40 452 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 CHST11Q9NPF2 352 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 PRMT8Q9NR22 394 aaPredicted RBP23.37■■□□□ 1.33
HLA-C-208ENST00000487245 MED11Q9P086 117 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 KIF25Q9UIL4 384 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 LRP12Q9Y561 859 aa23.37■■□□□ 1.33
HLA-C-208ENST00000487245 A0A0A6YYH2 397 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 MEGF11A6BM72 1044 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 A6NJ64 397 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 TMEM200CA6NKL6 621 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 RRASP10301 218 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 ZNF823P16415 610 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 NFYAP23511 347 aaPredicted RBP23.36■■□□□ 1.33
HLA-C-208ENST00000487245 ACTBP60709 375 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 ACTG1P63261 375 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 OR7A5Q15622 319 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 MPPED2Q15777 294 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 PCK2Q16822 640 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 SLC25A53Q5H9E4 307 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 COMMD7Q86VX2 200 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 CDH26Q8IXH8 852 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 COA3Q9Y2R0 106 aaPredicted RBP23.36■■□□□ 1.33
HLA-C-208ENST00000487245 R4GMQ9 66 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 MCRIP1C9JLW8 97 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 L7N2F9 121 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 ISG15P05161 165 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 GTF2F2P13984 249 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 GABRA1P14867 456 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 ETFDHQ16134 617 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 TMEM205Q6UW68 189 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 BPHLQ86WA6 291 aaPredicted RBP23.36■■□□□ 1.33
HLA-C-208ENST00000487245 PPP1R3BQ86XI6 285 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 OR6M1Q8NGM8 313 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 SUN5Q8TC36 379 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 CCDC74BQ96LY2 380 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 SLC26A1Q9H2B4 701 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 PPP4R1LQ9P1A2 415 aa23.36■■□□□ 1.33
HLA-C-208ENST00000487245 ZNF107Q9UII5 783 aaPredicted RBP23.36■■□□□ 1.33
HLA-C-208ENST00000487245 IGLV3-32A0A0A0MS00 114 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 C2orf72A6NCS6 295 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 YKT6O15498 198 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 KDM4BO94953 1096 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 ACHEP22303 614 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 GUCA2AQ02747 115 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.35■■□□□ 1.33
HLA-C-208ENST00000487245 TMEM229BQ8NBD8 167 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 ELMOD3Q96FG2 381 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 MRGPRX4Q96LA9 322 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 FOXN4Q96NZ1 517 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 C1orf198Q9H425 327 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 FANCFQ9NPI8 374 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 KLRF1Q9NZS2 232 aa23.35■■□□□ 1.33
HLA-C-208ENST00000487245 ENPP1P22413 925 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 ZNF41P51814 821 aaPredicted RBP23.34■■□□□ 1.33
HLA-C-208ENST00000487245 TLE3Q04726 772 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 NHLRC3Q5JS37 347 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 OR7E24Q6IFN5 339 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 RFPL4BQ6ZWI9 263 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 SLC22A8Q8TCC7 542 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 DHRS9Q9BPW9 319 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 CRB3Q9BUF7 120 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 SLCO5A1Q9H2Y9 848 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 ALKBH4Q9NXW9 302 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 OPN4Q9UHM6 478 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 B3GALT5Q9Y2C3 310 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 CABIN1Q9Y6J0 2220 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 H3BSH0 61 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 LDLRAD4O15165 306 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 AQP8O94778 261 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 HLA-DOBP13765 273 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 HTR2CP28335 458 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 FOXF1Q12946 379 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 PMS2CLQ68D20 193 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 STEAP1BQ6NZ63 245 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 DEGS2Q6QHC5 323 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 SLC26A10Q8NG04 563 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 OR2AK2Q8NG84 335 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 OR4D10Q8NGI6 311 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 OR52B4Q8NGK2 314 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 PTX4Q96A99 478 aa23.34■■□□□ 1.33
HLA-C-208ENST00000487245 ARL5BQ96KC2 179 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms