RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PAX2Q02962 417 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 ENDOGQ14249 297 aaKnown RBP16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 ARL9Q6T311 187 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 FOXL2NBQ6ZUU3 175 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 SPATC1Q76KD6 591 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 DPP10Q8N608 796 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 TSPEARQ8WU66 669 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 MAN2C1Q9NTJ4 1040 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 INTS9Q9NV88 658 aaKnown RBP16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 PPP1R3CQ9UQK1 317 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 LRCH1Q9Y2L9 728 aa16.32■□□□□ 0.2
SMPDL3A-202ENST00000487215 MDFIC2A0A1B0GVS7 189 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 PLATP00750 562 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 PPIAL4GP0DN37 164 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 TNFRSF1BP20333 461 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 GSTM3P21266 225 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 OCLNQ16625 522 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 ALG10Q5BKT4 473 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 INTS11Q5TA45 600 aaKnown RBP16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 C16orf87Q6PH81 154 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 NPEPL1Q8NDH3 523 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 RASSF5Q8WWW0 418 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 UPRTQ96BW1 309 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 RBP7Q96R05 134 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 IL19Q9UHD0 177 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 IL20RAQ9UHF4 553 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 RIMS3Q9UJD0 308 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 NDRG4Q9ULP0 352 aaKnown RBP16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 HIF3AQ9Y2N7 669 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 SH3GLB1Q9Y371 365 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 MMP24Q9Y5R2 645 aa16.31■□□□□ 0.2
SMPDL3A-202ENST00000487215 VWFP04275 2813 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 TRAV40A0A0B4J280 105 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 A0A1W2PPL8 197 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 HMGB1P1B2RPK0 211 aaPredicted RBP16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 TMEM178BH3BS89 294 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 OR5F1O95221 314 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 WNT2P09544 360 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 KITLGP21583 273 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 MMP16P51512 607 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 RPL27P61353 136 aaKnown RBP16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 SRSF4Q08170 494 aaKnown RBP16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 PIN1Q13526 163 aaPredicted RBP16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 CCDC80Q76M96 950 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 MUC20Q8N307 709 aaPredicted RBP16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 OR10A6Q8NH74 314 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 OR2V2Q96R30 315 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 SIKE1Q9BRV8 207 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 SSBP3Q9BWW4 388 aaPredicted RBP16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 TBCCD1Q9NVR7 557 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 MED31Q9Y3C7 131 aa16.3■□□□□ 0.2
SMPDL3A-202ENST00000487215 SURF4O15260 269 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 HOXA3O43365 443 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 PIP5K1CO60331 668 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 SHOX2O60902 331 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 SCG5P05408 212 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 MSR1P21757 451 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 GUCA1AP43080 201 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 ERFP50548 548 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 GZMMP51124 257 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 VMACQ2NL98 169 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 BTNL3Q6UXE8 466 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 LRRN1Q6UXK5 716 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 SYT9Q86SS6 491 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 FNDC8Q8TC99 324 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 WFDC12Q8WWY7 111 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 CMBLQ96DG6 245 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 THOC1Q96FV9 657 aaKnown RBP16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 MAGEB18Q96M61 343 aa16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 POLR2J2Q9GZM3 115 aaKnown RBP16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 POLR2J3Q9H1A7 115 aaKnown RBP16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 PRKDCP78527 4128 aaKnown RBP16.29■□□□□ 0.2
SMPDL3A-202ENST00000487215 IGHV2-70DA0A0C4DH43 119 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 C12orf71A8MTZ7 269 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 COX5BP10606 129 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 RPS2P15880 293 aaKnown RBP16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 TUBG1P23258 451 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 NFYCQ13952 458 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 TTMPQ5BVD1 217 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 IGFN1Q86VF2 1251 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 POU5F2Q8N7G0 328 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 DACT3Q96B18 629 aaPredicted RBP16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 GCM1Q9NP62 436 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 EMC7Q9NPA0 242 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 POLE4Q9NR33 117 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 TUBG2Q9NRH3 451 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 MRGBPQ9NV56 204 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 PDP1Q9P0J1 537 aaPredicted RBP16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 STARD10Q9Y365 291 aa16.28■□□□□ 0.2
SMPDL3A-202ENST00000487215 DOK2O60496 412 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 ZNF205O95201 554 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 KNG1P01042 644 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 HTR5AP47898 357 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 CTXN1P60606 82 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 GNB2P62879 340 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 DEFB112Q30KQ8 113 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 METTL21CQ5VZV1 264 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 FAM205BPQ63HN1 556 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 KLBQ86Z14 1044 aa16.27■□□□□ 0.2
SMPDL3A-202ENST00000487215 KIR3DL3Q8N743 410 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms