RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SPNS3Q6ZMD2 512 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 OR1K1Q8NGR3 316 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 OR8D1Q8WZ84 308 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 FBXO17Q96EF6 278 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 SMIM10Q96HG1 83 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 XPO6Q96QU8 1125 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 NAPGQ99747 312 aaPredicted RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 MED10Q9BTT4 135 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 SRRQ9GZT4 340 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CXCL16Q9H2A7 254 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 EML4Q9HC35 981 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 MYO18BQ8IUG5 2567 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 SPAG17Q6Q759 2223 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 IGSF10Q6WRI0 2623 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 F8VP50 259 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 PFKFB2O60825 505 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CDK2AP2O75956 126 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 NGFP01138 241 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 KRT16P08779 473 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 MBL2P11226 248 aaPredicted RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 KDELR2P33947 212 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 PTGDSP41222 190 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CSKP41240 450 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 MAGEA2P43356 314 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 EEF1A1P68104 462 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 TUBA1BP68363 451 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 DR1Q01658 176 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 DHODHQ02127 395 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 FNBP1LQ5T0N5 605 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 STPG1Q5TH74 334 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 EEF1A1P5Q5VTE0 462 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ZNF57Q68EA5 555 aaPredicted RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 CRIP3Q6Q6R5 217 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 AHSA2Q719I0 299 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 TUBA1AQ71U36 451 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 S100A7AQ86SG5 101 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ZNF575Q86XF7 245 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 MARCH9Q86YJ5 346 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CNGA4Q8IV77 575 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 DCP1BQ8IZD4 617 aaKnown RBP2.73□□□□□ -1.97
SMC6-208ENST00000481708 SLC22A15Q8IZD6 547 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ZNF786Q8N393 782 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 OR5D18Q8NGL1 313 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 OR2Y1Q8NGV0 311 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 LYPD6BQ8NI32 183 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 TCP11Q8WWU5 503 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 FGF13Q92913 245 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 SMARCD2Q92925 531 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CYP2S1Q96SQ9 504 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 SLC40A1Q9NP59 571 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 CSNK1G3Q9Y6M4 447 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ARHGAP21Q5T5U3 1957 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 FAM186AA6NE01 2351 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 KMT2AQ03164 3969 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 ACACBO00763 2458 aa2.73□□□□□ -1.97
SMC6-208ENST00000481708 K7ERI5 159 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PMS2P2O95744 297 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 VWA2Q5GFL6 755 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PPM1LQ5SGD2 360 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 VAX1Q5SQQ9 334 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PIANPQ8IYJ0 282 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ELMOD1Q8N336 334 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 CIARTQ8N365 385 aaPredicted RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 OR9A4Q8NGU2 314 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 OR2T11Q8NH01 316 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 FCAMRQ8WWV6 532 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PAPOLGQ9BWT3 736 aaKnown RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 OR51B6Q9H340 312 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 Q9HAA7 133 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 CUTCQ9NTM9 273 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ELOVL5Q9NYP7 299 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 VPS13BQ7Z7G8 4022 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 GOSR2O14653 212 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 SGCEO43556 437 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PRKYO43930 277 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 OR7A10O76100 309 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 FGGP02679 453 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 OR1E1P30953 314 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 CDKN2CP42773 168 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 GPR1P46091 355 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PRKXP51817 358 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 RIPPLY3P57055 190 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 HILS1P60008 231 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 GTF2BQ00403 316 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 COL10A1Q03692 680 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 VAMP3Q15836 100 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 DGUOKQ16854 277 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 C9orf135Q5VTT2 229 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 SLC16A11Q8NCK7 471 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 NUS1Q96E22 293 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PACRGQ96M98 296 aaPredicted RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 ZNF578Q96N58 590 aaPredicted RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 NIPAL2Q9H841 368 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ISYNA1Q9NPH2 558 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ZNF224Q9NZL3 707 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 CACNA1HO95180 2353 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 RAD51BO15315 384 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 SULT1B1O43704 296 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 HBQ1P09105 142 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PSMC3P17980 439 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms