RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 ZSCAN4Q8NAM6 433 aaPredicted RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 GTF3AQ92664 365 aaKnown RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 INSM2Q96T92 566 aaPredicted RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 GGACTQ9BVM4 153 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 SPHK2Q9NRA0 654 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 SPEGQ15772 3267 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 A0A1W2PPH5 198 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 RHPN2P1A8MT19 583 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 MFNGO00587 321 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 ABHD16AO95870 558 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 ERCC1P07992 297 aaPredicted RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 ZNF888P0CJ79 500 aaPredicted RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 RPS27P42677 84 aaKnown RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 GLP1RP43220 463 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 TSFMP43897 325 aaKnown RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 CSNK1EP49674 416 aaKnown RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 EMDP50402 254 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 MEF2DQ14814 521 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 NCMAPQ5T1S8 102 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 OR6N2Q8NGY6 317 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 MCHR2Q969V1 340 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 KIRREL1Q96J84 757 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 KLK13Q9UKR3 277 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 MRPS33Q9Y291 106 aaKnown RBP12.13□□□□□ -0.47
DFFB-209ENST00000477548 OBSL1O75147 1896 aa12.13□□□□□ -0.47
DFFB-209ENST00000477548 FITM1A5D6W6 292 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 C9JQL5 133 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 LATO43561 262 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 LDB3O75112 727 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 IL2RAP01589 272 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 SERPINA5P05154 406 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 PCCBP05166 539 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 C8AP07357 584 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 ADRB3P13945 408 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 RAB5AP20339 215 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 LAP3P28838 519 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 TACR3P29371 465 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 LPAR6P43657 344 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 MLF2Q15773 248 aaPredicted RBP12.12□□□□□ -0.47
DFFB-209ENST00000477548 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 TMPPEQ6ZT21 453 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 CDRT4Q8N9R6 151 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 DUSP22Q9NRW4 184 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 ASH2LQ9UBL3 628 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 CACFD1Q9UGQ2 172 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 C19orf53Q9UNZ5 99 aaPredicted RBP12.12□□□□□ -0.47
DFFB-209ENST00000477548 MRPS23Q9Y3D9 190 aaKnown RBP12.12□□□□□ -0.47
DFFB-209ENST00000477548 A0A1W2PPC1 479 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 TMEM235A6NFC5 223 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 BLOC1S5-TXNDC5H3BN57 136 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 M0R036 132 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 ARPC3O15145 178 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 MBTPS2O43462 519 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 OIP5O43482 229 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 LRP3O75074 770 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 ADH1CP00326 375 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 LRG1P02750 347 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 PRNPP04156 253 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 LINC00271P0C7V0 271 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 CPMP14384 443 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 MAP3K8P41279 467 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 PPA1Q15181 289 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 CFAP161Q6P656 301 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 SLC41A2Q96JW4 573 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 SMIM8Q96KF7 97 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 MAP3K3Q99759 626 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 OCSTAMPQ9BR26 566 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 RNF126Q9BV68 326 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 TOLLIPQ9H0E2 274 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 UFSP2Q9NUQ7 469 aa12.12□□□□□ -0.47
DFFB-209ENST00000477548 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 MSGN1A6NI15 193 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 C2orf74A8MZ97 194 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 NPIPB9F8W1W9 429 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 RRP8O43159 456 aaKnown RBP12.11□□□□□ -0.47
DFFB-209ENST00000477548 STK17BO94768 372 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 CD5P06127 495 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 RHOP08100 348 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 ACKR3P25106 362 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 ACAA2P42765 397 aaKnown RBP12.11□□□□□ -0.47
DFFB-209ENST00000477548 HGFACQ04756 655 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 PMPCAQ10713 525 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 EXOSC7Q15024 291 aaKnown RBP12.11□□□□□ -0.47
DFFB-209ENST00000477548 ULK3Q6PHR2 472 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 KIRREL2Q6UWL6 708 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 RNF44Q7L0R7 432 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 PRSS35Q8N3Z0 413 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
DFFB-209ENST00000477548 OR2L3Q8NG85 312 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 ZCCHC10Q8TBK6 192 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 ADAMTS17Q8TE56 1095 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 SECTM1Q8WVN6 248 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 NKD1Q969G9 470 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 SLC17A9Q9BYT1 436 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 TREM2Q9NZC2 230 aa12.11□□□□□ -0.47
DFFB-209ENST00000477548 KPTNQ9Y664 436 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms