RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 HDAC2Q92769 488 aaKnown RBP13.71□□□□□ -0.21
APOBEC3F-203ENST00000476513 CMBLQ96DG6 245 aa13.71□□□□□ -0.21
APOBEC3F-203ENST00000476513 TMEM246Q9BRR3 403 aa13.71□□□□□ -0.21
APOBEC3F-203ENST00000476513 ZNF426Q9BUY5 554 aa13.71□□□□□ -0.21
APOBEC3F-203ENST00000476513 TMEM109Q9BVC6 243 aa13.71□□□□□ -0.21
APOBEC3F-203ENST00000476513 MEPEQ9NQ76 525 aaPredicted RBP13.71□□□□□ -0.21
APOBEC3F-203ENST00000476513 INIPQ9NRY2 104 aa13.71□□□□□ -0.21
APOBEC3F-203ENST00000476513 IFNL4K9M1U5 179 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 TNFRSF13BO14836 293 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 GPR137BO60478 399 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 ABHD16AO95870 558 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 CST2P09228 141 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 LAP3P28838 519 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 AQP2P41181 271 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 DUSP7Q16829 419 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 SLC25A47Q6Q0C1 308 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 ARL9Q6T311 187 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 RBM45Q8IUH3 476 aaKnown RBP13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 NPEPL1Q8NDH3 523 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 GPR32P1Q8NGA4 272 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 OR8B3Q8NGG8 313 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 OR4D11Q8NGI4 311 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 VANGL1Q8TAA9 524 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 ZNF420Q8TAQ5 688 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 DYRK2Q92630 601 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 MPP4Q96JB8 637 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 OR8B2Q96RD0 313 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 OR52B2Q96RD2 323 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 IKZF5Q9H5V7 419 aa13.7□□□□□ -0.22
APOBEC3F-203ENST00000476513 TRAPPC13A5PLN9 417 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 G3V4G9 280 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 OPN1SWP03999 348 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 PPIBP23284 216 aaKnown RBP13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 PITPNBP48739 271 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 ERFP50548 548 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 CD47Q08722 323 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 RUNDC3AQ59EK9 446 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 TTMPQ5BVD1 217 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 MAVSQ7Z434 540 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 C10orf82Q8WW14 230 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 HAVCR1Q96D42 359 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 PAIP2Q9BPZ3 127 aaKnown RBP13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 CDADC1Q9BWV3 514 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 TBCCD1Q9NVR7 557 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 THAP1Q9NVV9 213 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 VAPAQ9P0L0 249 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 STX18Q9P2W9 335 aaKnown RBP13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 GMEB1Q9Y692 573 aa13.69□□□□□ -0.22
APOBEC3F-203ENST00000476513 KMT2CQ8NEZ4 4911 aaKnown RBP13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 C3orf80F5H4A9 247 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 H0YL77 283 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 PIN1P1O15428 100 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 RGS16O15492 202 aaPredicted RBP13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 SNNO75324 88 aaPredicted RBP13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 GPX2P18283 190 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 FUT1P19526 365 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 TUBG1P23258 451 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 PCBP3P57721 371 aaKnown RBP13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 PCBD1P61457 104 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 ENDOGQ14249 297 aaKnown RBP13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 C2orf68Q2NKX9 166 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 KRT71Q3SY84 523 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 ZNF404Q494X3 552 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 FAM201AQ5SY85 155 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 WDR25Q64LD2 544 aaPredicted RBP13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 NLRC3Q7RTR2 1065 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 MOSPD2Q8NHP6 518 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 TBC1D15Q8TC07 691 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 PRSS27Q9BQR3 290 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 PCGF1Q9BSM1 259 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 KCNK9Q9NPC2 374 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 TUBG2Q9NRH3 451 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 CLN8Q9UBY8 286 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 NDRG4Q9ULP0 352 aaKnown RBP13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 ANGPT4Q9Y264 503 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 STARD10Q9Y365 291 aa13.68□□□□□ -0.22
APOBEC3F-203ENST00000476513 TRBV5-3A0A0A0MS03 114 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 C5orf63A6NC05 138 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 GMNCA6NCL1 334 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 C22orf46C9J442 243 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 OR7A10O76100 309 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 SFTPBP07988 381 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 PAGE3Q5JUK9 113 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 KPRPQ5T749 579 aaPredicted RBP13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 FOXL2NBQ6ZUU3 175 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 CLDN22Q8N7P3 220 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 PFN4Q8NHR9 129 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 MEGF10Q96KG7 1140 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 MAGEB18Q96M61 343 aa13.67□□□□□ -0.22
APOBEC3F-203ENST00000476513 IGHV3-64DA0A0J9YX35 117 aa13.66□□□□□ -0.22
APOBEC3F-203ENST00000476513 CENPVL3A0A0U1RRI6 287 aa13.66□□□□□ -0.22
APOBEC3F-203ENST00000476513 NPIPB13A6NJU9 1138 aa13.66□□□□□ -0.22
APOBEC3F-203ENST00000476513 NPIPB4C9JG80 1138 aa13.66□□□□□ -0.22
APOBEC3F-203ENST00000476513 M0QX08 132 aa13.66□□□□□ -0.22
APOBEC3F-203ENST00000476513 ENSAO43768 121 aaKnown RBP13.66□□□□□ -0.22
APOBEC3F-203ENST00000476513 FSTL3O95633 263 aa13.66□□□□□ -0.22
APOBEC3F-203ENST00000476513 IGHV4-59P01825 116 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms