RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 REV1Q9UBZ9 1251 aa13.89□□□□□ -0.19
COL1A1-205ENST00000476387 GPR160Q9UJ42 338 aa13.89□□□□□ -0.19
COL1A1-205ENST00000476387 POLR1DQ9Y2S0 133 aa13.89□□□□□ -0.19
COL1A1-205ENST00000476387 IMPA2O14732 288 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 GYG2O15488 501 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 CCNB2O95067 398 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 RENP00797 406 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 CRABP1P29762 137 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 CHN2P52757 468 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 HMGA2P52926 109 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 UCP2P55851 309 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 KLF3P57682 345 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-205ENST00000476387 AQP6Q13520 282 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 RIN1Q13671 783 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 FAM120AOSQ5T036 256 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 RPL13AP3Q6NVV1 102 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 LEG1Q6P5S2 330 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 UGT2A3Q6UWM9 527 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 LRP11Q86VZ4 500 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 PHC2Q8IXK0 858 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 OR9Q2Q8NGE9 314 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 OR1J1Q8NGS3 322 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 SYNPRQ8TBG9 265 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 SNX33Q8WV41 574 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 POM121L2Q96KW2 1035 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 REPIN1Q9BWE0 567 aaKnown RBP13.88□□□□□ -0.19
COL1A1-205ENST00000476387 NDRG4Q9ULP0 352 aaKnown RBP13.88□□□□□ -0.19
COL1A1-205ENST00000476387 SAMHD1Q9Y3Z3 626 aaKnown RBP13.88□□□□□ -0.19
COL1A1-205ENST00000476387 SVEP1Q4LDE5 3571 aa13.88□□□□□ -0.19
COL1A1-205ENST00000476387 ARPC3O15145 178 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 DOK2O60496 412 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 TGFAP01135 160 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 RAP2AP10114 183 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 ZNF250P15622 560 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 ALDH3B1P43353 468 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 CENPAP49450 140 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 ERVS71-1P61550 626 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 TRAP1Q12931 704 aaKnown RBP13.87□□□□□ -0.19
COL1A1-205ENST00000476387 MAD2L1BPQ15013 274 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-205ENST00000476387 OR2T5Q6IEZ7 315 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 ZNF774Q6NX45 483 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 PGM2L1Q6PCE3 622 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 OR2T29Q8NH02 315 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 BTBD10Q9BSF8 475 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 NUAK2Q9H093 628 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 CHODLQ9H9P2 273 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 SLCO1C1Q9NYB5 712 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 TAAR3PQ9P1P4 343 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 MYEF2Q9P2K5 600 aaKnown RBP13.87□□□□□ -0.19
COL1A1-205ENST00000476387 COA3Q9Y2R0 106 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-205ENST00000476387 CDH10Q9Y6N8 788 aa13.87□□□□□ -0.19
COL1A1-205ENST00000476387 LOC100509620A0A075B734 347 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 LRP5LA4QPB2 252 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 SGCEO43556 437 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 IDH3BO43837 385 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 LILRA1O75019 489 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 SCG5P05408 212 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 GCH1P30793 250 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 CDKN2AP42771 156 aaKnown RBP13.86□□□□□ -0.19
COL1A1-205ENST00000476387 HTR5AP47898 357 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 LSM6P62312 80 aaKnown RBP13.86□□□□□ -0.19
COL1A1-205ENST00000476387 ARL9Q6T311 187 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 AQP11Q8NBQ7 271 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 OR4C15Q8NGM1 316 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 OR4K13Q8NH42 304 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 SNX18Q96RF0 628 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 EGLN3Q9H6Z9 239 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 ELOVL3Q9HB03 270 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 TBC1D23Q9NUY8 699 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 PLEK2Q9NYT0 353 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 U3KQV3 271 aa13.86□□□□□ -0.19
COL1A1-205ENST00000476387 IGLV3-9A0A075B6K5 115 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 DHRS12A0PJE2 317 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 AQP12BA6NM10 295 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 ACOT8O14734 319 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 CLPTM1O96005 669 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 MT-ND5P03915 603 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 COX5BP10606 129 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 HIST1H1CP16403 213 aaKnown RBP13.85□□□□□ -0.19
COL1A1-205ENST00000476387 HOXB6P17509 224 aaKnown RBP13.85□□□□□ -0.19
COL1A1-205ENST00000476387 WNT5AP41221 380 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 ARHGDIAP52565 204 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 MRPS11P82912 194 aaKnown RBP13.85□□□□□ -0.19
COL1A1-205ENST00000476387 PPP1R8Q12972 351 aaKnown RBP13.85□□□□□ -0.19
COL1A1-205ENST00000476387 FLOT2Q14254 428 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 MOGQ16653 247 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 ALKBH6Q3KRA9 238 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 ZNF718Q3SXZ3 478 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 CLEC12AQ5QGZ9 265 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 RFPL4BQ6ZWI9 263 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-205ENST00000476387 AQP12AQ8IXF9 295 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 C1orf174Q8IYL3 243 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 ZNF101Q8IZC7 436 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 SDR9C7Q8NEX9 313 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 ABHD4Q8TB40 342 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 C1orf159Q96HA4 380 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 TSSK2Q96PF2 358 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 NMNAT3Q96T66 252 aa13.85□□□□□ -0.19
COL1A1-205ENST00000476387 SOX7Q9BT81 388 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms