RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SLC7A7Q9UM01 511 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 RYR3Q15413 4870 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 TANC2Q9HCD6 1990 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 TET2Q6N021 2002 aaPredicted RBP7.78□□□□□ -1.16
VCL-204ENST00000472585 PLSCR5A0PG75 271 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 PRORSD1PA6NEY8 169 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 CEACAM18A8MTB9 384 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 SRRM5B3KS81 715 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 G3V4G9 280 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 TMEM178BH3BS89 294 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 CSF1P09603 554 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 SLC6A2P23975 617 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 PMELP40967 661 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 GDI2P50395 445 aaKnown RBP7.78□□□□□ -1.16
VCL-204ENST00000472585 ZNF84P51523 738 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 NCALDP61601 193 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 BTG1P62324 171 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 HOXA4Q00056 320 aaPredicted RBP7.78□□□□□ -1.16
VCL-204ENST00000472585 ENDOGQ14249 297 aaKnown RBP7.78□□□□□ -1.16
VCL-204ENST00000472585 RUNDC3AQ59EK9 446 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 MTX3Q5HYI7 312 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 FAM201AQ5SY85 155 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 OTPQ5XKR4 325 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 FAM205BPQ63HN1 556 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 TTC33Q6PID6 262 aaPredicted RBP7.78□□□□□ -1.16
VCL-204ENST00000472585 RANBP3LQ86VV4 465 aaPredicted RBP7.78□□□□□ -1.16
VCL-204ENST00000472585 KRT73Q86Y46 540 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 HIPK4Q8NE63 616 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 VANGL1Q8TAA9 524 aaPredicted RBP7.78□□□□□ -1.16
VCL-204ENST00000472585 C10orf82Q8WW14 230 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 TAMM41Q96BW9 452 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 SAMD8Q96LT4 415 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 EBF4Q9BQW3 602 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 CHIAQ9BZP6 476 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 RASSF4Q9H2L5 321 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 ASH2LQ9UBL3 628 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 OR5V1Q9UGF6 321 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 ZDHHC8Q9ULC8 765 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 STARD10Q9Y365 291 aa7.78□□□□□ -1.16
VCL-204ENST00000472585 TRAV40A0A0B4J280 105 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 TMEM120BA0PK00 339 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 TRAPPC13A5PLN9 417 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 SERPINB7O75635 380 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 PPIAL4GP0DN37 164 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 UMPSP11172 480 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 TNFRSF1BP20333 461 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 LOXL3P58215 753 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 FHL1Q13642 323 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 ESCO2Q56NI9 601 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 WDR93Q6P2C0 686 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 LYPD2Q6UXB3 125 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 BTNL3Q6UXE8 466 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 FOXL2NBQ6ZUU3 175 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 NANOGNBQ7Z5D8 188 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 SPICQ8N5J4 248 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 OR2Z1Q8NG97 314 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 OR10S1Q8NGN2 331 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 ZNF420Q8TAQ5 688 aaPredicted RBP7.77□□□□□ -1.17
VCL-204ENST00000472585 TMEM255BQ8WV15 326 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 RAB40AQ8WXH6 277 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 CMBLQ96DG6 245 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 SPDL1Q96EA4 605 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 C4orf45Q96LM5 186 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 CPPED1Q9BRF8 314 aaPredicted RBP7.77□□□□□ -1.17
VCL-204ENST00000472585 PCDHAC1Q9H158 963 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 CENPHQ9H3R5 247 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 MARCH7Q9H992 704 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 NANOGQ9H9S0 305 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 GCM1Q9NP62 436 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 CCNB1IP1Q9NPC3 277 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 CYSLTR2Q9NS75 346 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 CCDC167Q9P0B6 97 aa7.77□□□□□ -1.17
VCL-204ENST00000472585 EIF3KQ9UBQ5 218 aaKnown RBP7.77□□□□□ -1.17
VCL-204ENST00000472585 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.77□□□□□ -1.17
VCL-204ENST00000472585 V9GYY5 206 aaPredicted RBP7.77□□□□□ -1.17
VCL-204ENST00000472585 IGHV2-70DA0A0C4DH43 119 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 IGHV3-64DA0A0J9YX35 117 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 KIR2DS1A0A191URI9 304 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 A0A1W2PRG6 482 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 C5orf63A6NC05 138 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 CENPBD1B2RD01 187 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 H0YL77 283 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 TIMM8AO60220 97 aaPredicted RBP7.76□□□□□ -1.17
VCL-204ENST00000472585 PIP5K1CO60331 668 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 SHOX2O60902 331 aaPredicted RBP7.76□□□□□ -1.17
VCL-204ENST00000472585 ENTPD5O75356 428 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 CLPXO76031 633 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 OR7A10O76100 309 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 TGDSO95455 350 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 CYB5R3P00387 301 aaPredicted RBP7.76□□□□□ -1.17
VCL-204ENST00000472585 MT-ND1P03886 318 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 HIST1H2ABP04908 130 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 CST2P09228 141 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 KITLGP21583 273 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 LIPAP38571 399 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 MDH2P40926 338 aaKnown RBP7.76□□□□□ -1.17
VCL-204ENST00000472585 IDH3AP50213 366 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 GZMMP51124 257 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 LRRN1Q6UXK5 716 aa7.76□□□□□ -1.17
VCL-204ENST00000472585 Q6YL49 198 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms