RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 NIPAL1Q6NVV3 410 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 NOXRED1Q6NXP6 359 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SCIMPQ6UWF3 145 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 C6orf89Q6UWU4 347 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 FAM92BQ6ZTR7 304 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 RFPL4BQ6ZWI9 263 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 NAXDQ8IW45 347 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 FNDC5Q8NAU1 212 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 BEST4Q8NFU0 473 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 OR2L5Q8NG80 312 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 OR4D9Q8NGE8 314 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 NT5CQ8TCD5 201 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 FCGR1BQ92637 280 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 RERGQ96A58 199 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SLCO4A1Q96BD0 722 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 C11orf24Q96F05 449 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 PPP1R36Q96LQ0 422 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 TGM7Q96PF1 710 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 TNFRSF13CQ96RJ3 184 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 TBCDQ9BTW9 1192 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 EDEM2Q9BV94 578 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 MS4A8Q9BY19 250 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 ROGDIQ9GZN7 287 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SPNS1Q9H2V7 528 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 LRTM1Q9HBL6 345 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SAR1AQ9NR31 198 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SOHLH2Q9NX45 425 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 RABL2AQ9UBK7 228 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 LAMP5Q9UJQ1 280 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 MGAT4AQ9UM21 535 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 MRPS7Q9Y2R9 242 aaKnown RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 KLF2Q9Y5W3 355 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-202ENST00000471307 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 FAM186AA6NE01 2351 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 SPTBP11277 2137 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 DNAH14Q0VDD8 3507 aa4.03□□□□□ -1.76
CCDC39-202ENST00000471307 A0A0J9YVX5 310 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 IGHV5-10-1A0A0J9YXX1 117 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 GNG14A0A1W2PPG7 69 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 H0YGG7 62 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 PSMD12O00232 456 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 MAGEB3O15480 346 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 NME6O75414 186 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 GMNNO75496 209 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ATP5HO75947 161 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 KBTBD11O94819 623 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 MFN2O95140 757 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 VENTXO95231 258 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ETHE1O95571 254 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 PTBP3O95758 552 aaKnown RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 LY6G6DO95868 133 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SERPIND1P05546 499 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SFTPBP07988 381 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ANXA4P09525 319 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SMIM10L1P0DMW3 83 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 CALCBP10092 127 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 THRAP10827 490 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 BCKDHAP12694 445 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 PVRP15151 417 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 NELFEP18615 380 aaKnown RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 PRPS1L1P21108 318 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 GPX3P22352 226 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 PRDX6P30041 224 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 TRPC1P48995 793 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 RAP1GDS1P52306 607 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 DIO3P55073 304 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 GFERP55789 205 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 CLDN8P56748 225 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 PPP1CAP62136 330 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SKP1P63208 163 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SLC3A1Q07837 685 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 RBBP4Q09028 425 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 STX5Q13190 355 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 CYLC2Q14093 348 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 FAM53BQ14153 422 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 MAPRE2Q15555 327 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ZSCAN26Q16670 478 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 NDUFA9Q16795 377 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ARMCX4Q5H9R4 360 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 AGAP6Q5VW22 663 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF770Q6IQ21 691 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 TRIM40Q6P9F5 258 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ZCCHC12Q6PEW1 402 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ABHD13Q7L211 337 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 COMMD6Q7Z4G1 85 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 VN1R4Q7Z5H5 301 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ASPGQ86U10 573 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 PARP8Q8N3A8 854 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 RNF175Q8N4F7 328 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 C11orf42Q8N5U0 333 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 RNASE8Q8TDE3 154 aaKnown RBP4.02□□□□□ -1.77
CCDC39-202ENST00000471307 STARD8Q92502 1023 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 MS4A6EQ96DS6 147 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 CMTM5Q96DZ9 223 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 DTNBP1Q96EV8 351 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SMIM10Q96HG1 83 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 FCRL1Q96LA6 429 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF285Q96NJ3 590 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 CATSPER2Q96P56 530 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms