RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 B3GNT2Q9NY97 397 aa7.17□□□□□ -1.26
SMC4-212ENST00000470240 MRPL15Q9P015 296 aaKnown RBP7.17□□□□□ -1.26
SMC4-212ENST00000470240 MGAT4CQ9UBM8 478 aa7.17□□□□□ -1.26
SMC4-212ENST00000470240 EIF3KQ9UBQ5 218 aaKnown RBP7.17□□□□□ -1.26
SMC4-212ENST00000470240 MTFP1Q9UDX5 166 aa7.17□□□□□ -1.26
SMC4-212ENST00000470240 ZNF107Q9UII5 783 aaPredicted RBP7.17□□□□□ -1.26
SMC4-212ENST00000470240 LRP12Q9Y561 859 aa7.17□□□□□ -1.26
SMC4-212ENST00000470240 SPAG17Q6Q759 2223 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 A0A1W2PNV4 684 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 CPED1A4D0V7 1026 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 C4orf47A7E2U8 309 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 PRR32B1ATL7 298 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 SMLR1H3BR10 107 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 CTAG2O75638 210 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 RLN1P04808 185 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 ISG15P05161 165 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 LPLP06858 475 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 GSTP1P09211 210 aaKnown RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 GTF2F2P13984 249 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 CTLA4P16410 223 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 ADRA2CP18825 462 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 HSD11B1P28845 292 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 EPHA8P29322 1005 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 EIF1P41567 113 aaKnown RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 GUCA1AP43080 201 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 DHPSP49366 369 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 ZNF81P51508 661 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 DLX5P56178 289 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 CLRN1P58418 232 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 TSPAN5P62079 268 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 SNRPD2P62316 118 aaKnown RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 POU3F1Q03052 451 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 CFHR1Q03591 330 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 FOXF1Q12946 379 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 TAF13Q15543 124 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 ST3GAL2Q16842 350 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 PRAMEF17Q5VTA0 474 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 ZNF626Q68DY1 528 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 TMEM225Q6GV28 225 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 C3orf33Q6P1S2 294 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 CPEB2Q7Z5Q1 589 aaKnown RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 CDH26Q8IXH8 852 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 PRSS35Q8N3Z0 413 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 SLC25A45Q8N413 288 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 SPICQ8N5J4 248 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 OR4K17Q8NGC6 315 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 OR2T35Q8NGX2 323 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 PIGKQ92643 395 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 PTX4Q96A99 478 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 CLDN23Q96B33 292 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 C8orf44Q96CB5 159 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 ORAI1Q96D31 301 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 NUDT22Q9BRQ3 303 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 GINS4Q9BRT9 223 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 UTP23Q9BRU9 249 aaKnown RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 DEFB126Q9BYW3 111 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 ULBP3Q9BZM4 244 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 OR11A1Q9GZK7 315 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 IRF2BPLQ9H1B7 796 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 CCDC86Q9H6F5 360 aaKnown RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 METTL17Q9H7H0 456 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 UBQLN2Q9UHD9 624 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 OR52A1Q9UKL2 312 aa7.16□□□□□ -1.26
SMC4-212ENST00000470240 PPIEQ9UNP9 301 aaKnown RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 RPH3AQ9Y2J0 694 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 COA3Q9Y2R0 106 aaPredicted RBP7.16□□□□□ -1.26
SMC4-212ENST00000470240 SPTBP11277 2137 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 TRAV8-7A0A075B6U6 113 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 TRAV18A0A075B6X5 111 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 IGHV3-20A0A0C4DH32 117 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 TMEM269A0A1B0GVZ9 245 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 A0A1B0GW55 424 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 LOC107986453A0A1B0GWG9 222 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 TUBAL3A6NHL2 446 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 C9J4A7 227 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 FTCDNL1E5RQL4 147 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 M0R233 179 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 CYB5AP00167 134 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 IGHG1P01857 330 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 KLK3P07288 261 aaPredicted RBP7.15□□□□□ -1.26
SMC4-212ENST00000470240 ADRB1P08588 477 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 DUX4L2P0CJ85 424 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 DUX4L3P0CJ86 424 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 DUX4L4P0CJ87 422 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 DUX4L5P0CJ88 424 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 DUX4L6P0CJ89 424 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 DUX4L7P0CJ90 424 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 ZNF20P17024 532 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 DCTDP32321 178 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 RPS27P42677 84 aaKnown RBP7.15□□□□□ -1.26
SMC4-212ENST00000470240 MECP2P51608 486 aaKnown RBP7.15□□□□□ -1.26
SMC4-212ENST00000470240 PER3P56645 1201 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 GALK2Q01415 458 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 SNTA1Q13424 505 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 MEF2DQ14814 521 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 ZMYND11Q15326 602 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 THEM4Q5T1C6 240 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 ZBTB37Q5TC79 503 aa7.15□□□□□ -1.26
SMC4-212ENST00000470240 C1QL3Q5VWW1 255 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms