RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 MSANTD1Q6ZTZ1 278 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 LYG2Q86SG7 212 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF695Q8IW36 515 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 KLHDC8AQ8IYD2 350 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 OR8B3Q8NGG8 313 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 OR51G2Q8NGK0 314 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 OR52K1Q8NGK4 314 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 OR1J2Q8NGS2 313 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 PIFOQ8TCI5 191 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 C10orf82Q8WW14 230 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 C17orf50Q8WW18 174 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 OR8B2Q96RD0 313 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 PELOQ9BRX2 385 aaKnown RBP3.75□□□□□ -1.81
HMGB1-207ENST00000468384 EGLN1Q9GZT9 426 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 KLK15Q9H2R5 256 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 SPNS1Q9H2V7 528 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 COQ10BQ9H8M1 238 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 SDHAF3Q9NRP4 125 aa3.75□□□□□ -1.81
HMGB1-207ENST00000468384 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 TRBV5-3A0A0A0MS03 114 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 IGLL5B9A064 214 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 K7EPI3 171 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF195O14628 629 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 PHYHO14832 338 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 TO15178 435 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 RAD51CO43502 376 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 IGHV1-46P01743 117 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 CATP04040 527 aaKnown RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 IFNA4P05014 189 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 MT1HL1P0DM35 61 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 OR8G3PP0DMU2 310 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 PSMA2P25787 234 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 EVI2BP34910 448 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 CRATP43155 626 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 PLA2G16P53816 162 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 STX17P56962 302 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 SELENOVP59797 346 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 PRB3Q04118 309 aaPredicted RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 DEFB136Q30KP8 78 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 SPRNQ5BIV9 151 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 CFAP157Q5JU67 520 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 TSPO2Q5TGU0 170 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 IGFL4Q6B9Z1 124 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 SIGIRRQ6IA17 410 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 DNAJC24Q6P3W2 148 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ZCCHC12Q6PEW1 402 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 DCUN1D2Q6PH85 259 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ACP7Q6ZNF0 438 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 APTXQ7Z2E3 356 aaKnown RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 VMO1Q7Z5L0 202 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 CCDC190Q86UF4 302 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 PNKDQ8N490 385 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF283Q8N7M2 679 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 OR1K1Q8NGR3 316 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 TMEM163Q8TC26 289 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF473Q8WTR7 871 aaKnown RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 GEMIN6Q8WXD5 167 aaKnown RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ANKRD7Q92527 254 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 BCL2L2Q92843 193 aaPredicted RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 OTULINQ96BN8 352 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ZBTB9Q96C00 473 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 MS4A6EQ96DS6 147 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 VPS39Q96JC1 886 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 MAPKAP1Q9BPZ7 522 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF717Q9BY31 904 aaPredicted RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF350Q9GZX5 532 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 C1orf21Q9H246 121 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 SLA2Q9H6Q3 261 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 MAGIXQ9H6Y5 334 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 CXorf21Q9HAI6 301 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 LYRM4Q9HD34 91 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 CHMP1AQ9HD42 196 aaPredicted RBP3.74□□□□□ -1.81
HMGB1-207ENST00000468384 TMEM45AQ9NWC5 275 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 SLCO1C1Q9NYB5 712 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 USH2AO75445 5202 aa3.74□□□□□ -1.81
HMGB1-207ENST00000468384 IGLV3-9A0A075B6K5 115 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 A0A087WZY1 265 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 A0A1W2PRV1 198 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF264O43296 627 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 TSPAN2O60636 221 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 NDUFB4O95168 129 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 NDUFB8O95169 186 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 CNIH1O95406 144 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 CT62P0C5K7 136 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 AZGP1P25311 298 aaKnown RBP3.73□□□□□ -1.81
HMGB1-207ENST00000468384 PAX6P26367 422 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 ARR3P36575 388 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 ZNF81P51508 661 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 CDH12P55289 794 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 KLF3P57682 345 aaPredicted RBP3.73□□□□□ -1.81
HMGB1-207ENST00000468384 LRRC74AQ0VAA2 488 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 SLC10A2Q12908 348 aaPredicted RBP3.73□□□□□ -1.81
HMGB1-207ENST00000468384 PNOCQ13519 176 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 TMEM176BQ3YBM2 270 aaPredicted RBP3.73□□□□□ -1.81
HMGB1-207ENST00000468384 C6orf136Q5SQH8 315 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 PIK3CD-AS1Q5SR53 167 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 C6orf10Q5SRN2 563 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 GGNBP1Q5YKI7 109 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 SUMO4Q6EEV6 95 aa3.73□□□□□ -1.81
HMGB1-207ENST00000468384 METTL2BQ6P1Q9 378 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms