RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 LRP12Q9Y561 859 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 TRBV5-7A0A0A0MS05 114 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 TRABD2BA6NFA1 517 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 ALX3O95076 343 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 SRD5A2P31213 254 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 DNASE1L1P49184 302 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 DYRK1AQ13627 763 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 THOC7Q6I9Y2 204 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 JMJD6Q6NYC1 403 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 OR10H5Q8NGA6 315 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 OR5H6Q8NGV6 325 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 OR2M2Q96R28 347 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 GFI1Q99684 422 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 ACTR6Q9GZN1 396 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 BRD7Q9NPI1 651 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 ANKRD10Q9NXR5 420 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 EMC3Q9P0I2 261 aa19.37■□□□□ 0.69
PDLIM2-216ENST00000464275 LANCL1O43813 399 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 RAD1O60671 282 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 SNRPBP14678 240 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 LAP3P28838 519 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 BTCP35070 178 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 SOX2P48431 317 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 RAC1P63000 192 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 RIPPLY1Q0D2K3 151 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 CAMK2DQ13557 499 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 SLC36A2Q495M3 483 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 UBE2NLQ5JXB2 153 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 OR7E24Q6IFN5 339 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 STAC2Q6ZMT1 411 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 ASB18Q6ZVZ8 466 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 DCXRQ7Z4W1 244 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 ST7LQ8TDW4 575 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 PSMF1Q92530 271 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 YIPF5Q969M3 257 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 THOC3Q96J01 351 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 MED28Q9H204 178 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 EMC7Q9NPA0 242 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 V9GY05 133 aa19.36■□□□□ 0.69
PDLIM2-216ENST00000464275 EIF1BO60739 113 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 STOMP27105 288 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 GPR85P60893 370 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 H3F3AP84243 136 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 TRIP6Q15654 476 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 C6orf183Q5T699 404 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 CD276Q5ZPR3 534 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 DEGS2Q6QHC5 323 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 CATSPERDQ86XM0 798 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 BEST3Q8N1M1 668 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 C11orf40Q8WZ69 217 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 NAA11Q9BSU3 229 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 GJE1A6NN92 205 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 IFITM5A6NNB3 132 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 ZNF726A6NNF4 738 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 AIPO00170 330 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 RAMP1O60894 148 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 ZNF780AO75290 641 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 PNPP00491 289 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 CYB561P49447 251 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 CSNK2A1P68400 391 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 UTS2BQ765I0 119 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 LINC00346Q8IVM7 164 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 ZNF433Q8N7K0 673 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 ZNF671Q8TAW3 534 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 B3GNT4Q9C0J1 378 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 ING4Q9UNL4 249 aa19.35■□□□□ 0.69
PDLIM2-216ENST00000464275 LOC101059948A0A1B0GTJ6 334 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 TNFSF15O95150 251 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 WNT11O96014 354 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 GNG2P59768 71 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 CSRP2Q16527 193 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 Q5BKY6 102 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 SLC25A47Q6Q0C1 308 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 KRT74Q7RTS7 529 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 OR10AC1Q8NH08 325 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 GHITMQ9H3K2 345 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 RANBP3Q9H6Z4 567 aaPredicted RBP19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 DIABLOQ9NR28 239 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 R4GMQ9 66 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 KNTC1P50748 2209 aa19.34■□□□□ 0.69
PDLIM2-216ENST00000464275 A0A0A6YYJ9 748 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 A0A0G2JMM0 328 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 A0A1W2PPB8 328 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 A0A1W2PRS3 328 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 KIR3DP1A8MWS1 328 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 TLX3O43711 291 aaPredicted RBP19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 SRSF10O75494 262 aaKnown RBP19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 VAMP5O95183 116 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 TOMM20Q15388 145 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 ODF4Q2M2E3 257 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 ZNF782Q6ZMW2 699 aaPredicted RBP19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 GLRX5Q86SX6 157 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 PIP4P1Q86T03 277 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 LRRTM1Q86UE6 522 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 ZNF227Q86WZ6 799 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 SMIM4Q8WVI0 70 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 DEDD2Q8WXF8 326 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 TMEM106AQ96A25 262 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 GTF2A1LQ9UNN4 478 aa19.33■□□□□ 0.69
PDLIM2-216ENST00000464275 SLC22A13Q9Y226 551 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms