RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ZNF583Q96ND8 569 aa10.73□□□□□ -0.69
C9orf3-211ENST00000463372 TRIM31Q9BZY9 425 aa10.73□□□□□ -0.69
C9orf3-211ENST00000463372 TUBG2Q9NRH3 451 aa10.73□□□□□ -0.69
C9orf3-211ENST00000463372 RLIMQ9NVW2 624 aa10.73□□□□□ -0.69
C9orf3-211ENST00000463372 RNF103-CHMP3A0A140T963 221 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 TP73O15350 636 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 HDAC3O15379 428 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 SBK3P0C264 359 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 ZNF32P17041 273 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 IMPDH1P20839 514 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 PAX6P26367 422 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 RPL38P63173 70 aaKnown RBP10.72□□□□□ -0.69
C9orf3-211ENST00000463372 HBA1P69905 142 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 OR8B8Q15620 311 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 Q6ZS46 218 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 PXKQ7Z7A4 578 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 TMEM139Q8IV31 216 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 ALDH16A1Q8IZ83 802 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 MIPOL1Q8TD10 442 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 TNFRSF14Q92956 283 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 HAVCR1Q96D42 359 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 FCRL1Q96LA6 429 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 DMRTB1Q96MA1 342 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 OSBPL9Q96SU4 736 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 ASPNQ9BXN1 380 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 LZTFL1Q9NQ48 299 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 TRIM36Q9NQ86 728 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 SF3B6Q9Y3B4 125 aaKnown RBP10.72□□□□□ -0.69
C9orf3-211ENST00000463372 CCL27Q9Y4X3 112 aa10.72□□□□□ -0.69
C9orf3-211ENST00000463372 F5H5P2 479 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 LGALS8O00214 317 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 ABHD16AO95870 558 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 DBIP07108 87 aaKnown RBP10.71□□□□□ -0.69
C9orf3-211ENST00000463372 GSTA1P08263 222 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 MYCNOSP40205 109 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 RAB25P57735 213 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 C2orf54Q08AI8 447 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 INTS11Q5TA45 600 aaKnown RBP10.71□□□□□ -0.69
C9orf3-211ENST00000463372 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 Q8N7P7 452 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 BOLLQ8N9W6 283 aaKnown RBP10.71□□□□□ -0.69
C9orf3-211ENST00000463372 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 OR6X1Q8NH79 312 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 PIFOQ8TCI5 191 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 POFUT1Q9H488 388 aa10.71□□□□□ -0.69
C9orf3-211ENST00000463372 TRAV36DV7A0A075B6V5 113 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 TRAV38-1A0A0B4J264 116 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 WDR91A4D1P6 747 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 CDHR4A6H8M9 788 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 RNASET2O00584 256 aaKnown RBP10.7□□□□□ -0.7
C9orf3-211ENST00000463372 LDLRAD4O15165 306 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 EIF3HO15372 352 aaKnown RBP eCLIP10.7□□□□□ -0.7
C9orf3-211ENST00000463372 ZNF75DP51815 510 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 BLCAPP62952 87 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 PSG4Q00888 419 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 RFTN2Q52LD8 501 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-211ENST00000463372 COLCA1Q6ZS62 124 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 NUDCD3Q8IVD9 361 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 RPP25LQ8N5L8 163 aaKnown RBP10.7□□□□□ -0.7
C9orf3-211ENST00000463372 Q8TCH9 128 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 ERGIC1Q969X5 290 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 SLC41A3Q96GZ6 507 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 MTHFD2LQ9H903 347 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-211ENST00000463372 KCNK9Q9NPC2 374 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-211ENST00000463372 PITPNC1Q9UKF7 332 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 TCF19Q9Y242 345 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 TMED5Q9Y3A6 229 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 JRKLQ9Y4A0 524 aa10.7□□□□□ -0.7
C9orf3-211ENST00000463372 EXOC1LA0A1B0GW35 172 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 FAM20BO75063 409 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 GYPAP02724 150 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 ERFP50548 548 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 DR1Q01658 176 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 ZCCHC23Q6ZST2 131 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 PEX5LQ8IYB4 626 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 TMEM151AQ8N4L1 468 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 OR8G5Q8NG78 346 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 OR52H1Q8NGJ2 320 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 ACTRT1Q8TDG2 376 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 PTP4A1Q93096 173 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 SLC25A44Q96H78 314 aaPredicted RBP10.69□□□□□ -0.7
C9orf3-211ENST00000463372 METTL8Q9H825 291 aaKnown RBP10.69□□□□□ -0.7
C9orf3-211ENST00000463372 MEAF6Q9HAF1 191 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 SIAEQ9HAT2 523 aa10.69□□□□□ -0.7
C9orf3-211ENST00000463372 NKX6-3A6NJ46 265 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 TMEM114B3SHH9 223 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 C11orf98E9PRG8 122 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 FCN3O75636 299 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 PRG2P13727 222 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 RPS4Y1P22090 263 aaKnown RBP10.68□□□□□ -0.7
C9orf3-211ENST00000463372 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
C9orf3-211ENST00000463372 ERVK-25P63136 954 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 HOXA4Q00056 320 aaPredicted RBP10.68□□□□□ -0.7
C9orf3-211ENST00000463372 PTGR1Q14914 329 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 PLA1AQ53H76 456 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 SLC35D2Q76EJ3 337 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 C11orf42Q8N5U0 333 aa10.68□□□□□ -0.7
C9orf3-211ENST00000463372 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms