RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MMP11P24347 488 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PTAFRP25105 342 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PAX6P26367 422 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 LAP3P28838 519 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 GPX4P36969 197 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CEACAM6P40199 344 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 RPL35P42766 123 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 XKP51811 444 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 AQP5P55064 265 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 MLLT10P55197 1068 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CASP9P55211 416 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 TMPRSS3P57727 454 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 OR4D2P58180 307 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC26A5P58743 744 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SORDQ00796 357 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 TNFRSF17Q02223 184 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ASAH1Q13510 395 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 NNATQ16517 81 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PCGF3Q3KNV8 242 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 NHSL2Q5HYW2 709 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 HIST2H2BCQ6DN03 193 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM71E1Q6IPT2 247 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC25A25Q6KCM7 469 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC18B1Q6NT16 456 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CLEC2AQ6UVW9 174 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 TMEM205Q6UW68 189 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 QSOX2Q6ZRP7 698 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 LINC00696Q6ZRV3 163 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 MSANTD1Q6ZTZ1 278 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM57BQ71RH2 274 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 OLIG3Q7RTU3 272 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 C16orf62Q7Z3J2 963 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SVOPLQ8N434 492 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 NFAM1Q8NET5 270 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 OR5T1Q8NG75 326 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 OR7A2PQ8NGA2 310 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 OR4M2Q8NGB6 313 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ZFP90Q8TF47 636 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PTPMT1Q8WUK0 201 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PSMF1Q92530 271 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 NSMAFQ92636 917 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CNRIP1Q96F85 164 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 THOC3Q96J01 351 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 IMMP1LQ96LU5 166 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 NPAS2Q99743 824 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SSX3Q99909 188 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 INPP5KQ9BT40 448 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 TRMOQ9BU70 441 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 NUDT9Q9BW91 350 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ROGDIQ9GZN7 287 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ING2Q9H160 280 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DSN1Q9H410 356 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 METTL8Q9H825 291 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 WDR54Q9H977 334 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 EML4Q9HC35 981 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CHMP1AQ9HD42 196 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SPAG4Q9NPE6 437 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PNRC2Q9NPJ4 139 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 C1orf109Q9NX04 203 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 IMPAD1Q9NX62 359 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ANKRD10Q9NXR5 420 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 TAS2R9Q9NYW1 312 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 COPZ2Q9P299 210 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 MYEF2Q9P2K5 600 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DUX4Q9UBX2 424 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PHF11Q9UIL8 331 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 MGAT4AQ9UM21 535 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ABCG2Q9UNQ0 655 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 TP53TG5Q9Y2B4 290 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CMAHPQ9Y471 501 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 PCDHGB1Q9Y5G3 927 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 V9GYQ6 96 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CELSR2Q9HCU4 2923 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 BSNQ9UPA5 3926 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 MTORP42345 2549 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ICE1Q9Y2F5 2266 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PCNX3Q9H6A9 2034 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 LOC100509620A0A075B734 347 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 IGHV1-45A0A0A0MS14 117 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 NSG1A0A0A6YYJ2 146 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 C9orf170A2RU37 121 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 URADA6NGE7 173 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 GABRR3A8MPY1 467 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 C17orf51A8MQB3 221 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 C17orf105B2RV13 164 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ANKRD28O15084 1053 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNHIT1O43257 154 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 TXNL1O43396 289 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 RGS14O43566 566 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PRKYO43930 277 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 TSPAN2O60636 221 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 GPR75O95800 540 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ANGPTL1O95841 491 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 TFPIP10646 304 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC2A1P11166 492 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 CPMP14384 443 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms