RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 AQP8O94778 261 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 PMS2P2O95744 297 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 IGF2P01344 180 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 MESTQ5EB52 335 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 LYPD4Q6UWN0 246 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 C3P1Q6ZMU1 363 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 DPY19L2P2Q6ZN68 376 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 ESPNLQ6ZVH7 1005 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 LHFPL3Q86UP9 236 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 SYT14Q8NB59 555 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 BHLHE23Q8NDY6 225 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 CD300LFQ8TDQ1 290 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 SNRNP40Q96DI7 357 aaKnown RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 LRR1Q96L50 414 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 PAPOLGQ9BWT3 736 aaKnown RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 Q9H521 79 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 SEPSECSQ9HD40 501 aaKnown RBP9.17□□□□□ -0.94
USP39-210ENST00000459775 TRAPPC4Q9Y296 219 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 RELNP78509 3460 aa9.17□□□□□ -0.94
USP39-210ENST00000459775 OR6C68A6NDL8 312 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 DCTN6O00399 190 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 HTR3BO95264 441 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 GPANK1O95872 356 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 IGHG3P01860 377 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 CD14P08571 375 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ADRA2AP08913 450 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 CD3GP09693 182 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 RNF224P0DH78 156 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 EDNRAP25101 427 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 MAP2K6P52564 334 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 SELENOVP59797 346 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PRPS1P60891 318 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 SLC35A1P78382 337 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 MVKQ03426 396 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PON3Q15166 354 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ETFDHQ16134 617 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 C6orf141Q5SZD1 244 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 CARD17Q5XLA6 110 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PAQR6Q6TCH4 344 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 NHLRC1Q6VVB1 395 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 SLC37A3Q8NCC5 494 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PNPLA2Q96AD5 504 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 C14orf79Q96F83 325 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ZNF385AQ96PM9 386 aaKnown RBP9.16□□□□□ -0.94
USP39-210ENST00000459775 APOL4Q9BPW4 351 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 OPN3Q9H1Y3 402 aaPredicted RBP9.16□□□□□ -0.94
USP39-210ENST00000459775 RERGLQ9H628 205 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ZC4H2Q9NQZ6 224 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ASF1BQ9NVP2 202 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PAK1IP1Q9NWT1 392 aaPredicted RBP9.16□□□□□ -0.94
USP39-210ENST00000459775 CORINQ9Y5Q5 1042 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 FAM172BPA6NC97 362 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 AQP7P3A6NL99 342 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PTGES3LE9PB15 166 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ARHGEF9O43307 516 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ACVR1BP36896 505 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 SCAND1P57086 179 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP39-210ENST00000459775 RASGEF1BQ0VAM2 473 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 ITGADQ13349 1161 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 C4orf17Q53FE4 359 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 SHFQ7M4L6 423 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 BIVMQ86UB2 503 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PPP1R35Q8TAP8 253 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 KISS1RQ969F8 398 aaPredicted RBP9.16□□□□□ -0.94
USP39-210ENST00000459775 METTL8Q9H825 291 aaKnown RBP9.16□□□□□ -0.94
USP39-210ENST00000459775 CNTD2Q9H8S5 307 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 PNPLA3Q9NST1 481 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 B3GALT5Q9Y2C3 310 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 SVILO95425 2214 aa9.16□□□□□ -0.94
USP39-210ENST00000459775 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 GJE1A6NN92 205 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 NUPL2O15504 423 aaKnown RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 TRAF3IP2O43734 574 aaPredicted RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 MBP02144 154 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 CTSSP25774 331 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 APOBEC3AP31941 199 aaPredicted RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 RCVRNP35243 200 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 ALDH3B1P43353 468 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 AGFG1P52594 562 aaKnown RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 BIDP55957 195 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 CSNK2A1P68400 391 aaPredicted RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 FMODQ06828 376 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 POU4F3Q15319 338 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 ZNF239Q16600 458 aaKnown RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 LEG1Q6P5S2 330 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 SLC35D2Q76EJ3 337 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 RPRMLQ8N4K4 120 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 ZIC4Q8N9L1 334 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 NPEPL1Q8NDH3 523 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 OR4D10Q8NGI6 311 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 TMEM163Q8TC26 289 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 FBLIM1Q8WUP2 373 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 ST8SIA4Q92187 359 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 YIPF5Q969M3 257 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 PLEKHA8Q96JA3 519 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 SLC38A2Q96QD8 506 aa9.15□□□□□ -0.94
USP39-210ENST00000459775 GPX7Q96SL4 187 aaPredicted RBP9.15□□□□□ -0.94
USP39-210ENST00000459775 C12orf57Q99622 126 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms