RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 RIPPLY3P57055 190 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 ZNF101Q8IZC7 436 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 OR8D4Q8NGM9 314 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 C10orf105Q8TEF2 133 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 GIPC3Q8TF64 312 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 SNX33Q8WV41 574 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 POP5Q969H6 163 aaKnown RBP16.05■□□□□ 0.16
USP39-209ENST00000458268 POM121L2Q96KW2 1035 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 B9D1Q9UPM9 204 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 C2CD3Q4AC94 2353 aa16.05■□□□□ 0.16
USP39-209ENST00000458268 H3BN98 237 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 ARPC3O15145 178 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 CSF3P09919 207 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 DAOP14920 347 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 GCH1P30793 250 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 PYCR1P32322 319 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 CBX1P83916 185 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 BNIP1Q12981 228 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 AQP6Q13520 282 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 RPL13AP3Q6NVV1 102 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 TMEM154Q6P9G4 183 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 PGM2L1Q6PCE3 622 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 CORO6Q6QEF8 472 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 DNM1P46Q6ZS02 220 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 RASSF6Q6ZTQ3 369 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 RFPL4BQ6ZWI9 263 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 LINC00346Q8IVM7 164 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 OR6V1Q8N148 313 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 SLC25A40Q8TBP6 338 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 SLC7A6Q92536 515 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 OTULINQ96BN8 352 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 PDP1Q9P0J1 537 aaPredicted RBP16.04■□□□□ 0.16
USP39-209ENST00000458268 FBXO9Q9UK97 447 aaPredicted RBP16.04■□□□□ 0.16
USP39-209ENST00000458268 NDRG4Q9ULP0 352 aaKnown RBP16.04■□□□□ 0.16
USP39-209ENST00000458268 GRIP1Q9Y3R0 1128 aa16.04■□□□□ 0.16
USP39-209ENST00000458268 OR6C68A6NDL8 312 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 TPD52L2O43399 206 aaKnown RBP16.03■□□□□ 0.16
USP39-209ENST00000458268 FKBP6O75344 327 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 ABHD16AO95870 558 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 SLC25A16P16260 332 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 GSTM3P21266 225 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 POU1F1P28069 291 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 RASSF2P50749 326 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 ZNF770Q6IQ21 691 aaPredicted RBP16.03■□□□□ 0.16
USP39-209ENST00000458268 TMEM179BQ7Z7N9 219 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 PROKR2Q8NFJ6 384 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 OR51L1Q8NGJ5 315 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 OR9Q1Q8NGQ5 310 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 TEX47Q8TBZ9 253 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 NEU4Q8WWR8 484 aaPredicted RBP16.03■□□□□ 0.16
USP39-209ENST00000458268 NIPSNAP1Q9BPW8 284 aa16.03■□□□□ 0.16
USP39-209ENST00000458268 IGLV1-36A0A0B4J1U3 117 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 RER1O15258 196 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 IDH3BO43837 385 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 NGFP01138 241 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 MPV17P39210 176 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 ARHGDIAP52565 204 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 PPP1CBP62140 327 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 PPP2R2BQ00005 443 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 ZNF718Q3SXZ3 478 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 UNQ6126/PRO20091Q6UXV3 157 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 VASH1Q7L8A9 365 aaPredicted RBP16.02■□□□□ 0.16
USP39-209ENST00000458268 SYT9Q86SS6 491 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 HS3ST5Q8IZT8 346 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 IQCF1Q8N6M8 205 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 UBASH3BQ8TF42 649 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 IPCEF1Q8WWN9 437 aaPredicted RBP16.02■□□□□ 0.16
USP39-209ENST00000458268 GTF3AQ92664 365 aaKnown RBP16.02■□□□□ 0.16
USP39-209ENST00000458268 C4orf45Q96LM5 186 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 FEVQ99581 238 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 CDADC1Q9BWV3 514 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 OR2J1Q9GZK6 312 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 MS4A5Q9H3V2 200 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 YY1AP1Q9H869 796 aa16.02■□□□□ 0.16
USP39-209ENST00000458268 SETD2Q9BYW2 2564 aaPredicted RBP16.02■□□□□ 0.15
USP39-209ENST00000458268 CSPG4Q6UVK1 2322 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 TLN2Q9Y4G6 2542 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 TVP23AA6NH52 213 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 BHLHE40O14503 412 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 TIPRLO75663 272 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 GYPBP06028 91 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 GAAP10253 952 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 EVX1P49640 407 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 LSM6P62312 80 aaKnown RBP16.01■□□□□ 0.15
USP39-209ENST00000458268 TEKQ02763 1124 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 SLC36A3Q495N2 470 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 ARL9Q6T311 187 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 OR2T33Q8NG76 320 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 OR4Q3Q8NH05 313 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 DGCR6LQ9BY27 220 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 RACGAP1Q9H0H5 632 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 ELOVL3Q9HB03 270 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 YAE1D1Q9NRH1 226 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 IL20Q9NYY1 176 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 GPR160Q9UJ42 338 aa16.01■□□□□ 0.15
USP39-209ENST00000458268 LOC390937A0A1W2PQ73 354 aa16■□□□□ 0.15
USP39-209ENST00000458268 INAFM1C9JVW0 142 aa16■□□□□ 0.15
USP39-209ENST00000458268 ATP5HO75947 161 aa16■□□□□ 0.15
USP39-209ENST00000458268 HPXP02790 462 aa16■□□□□ 0.15
USP39-209ENST00000458268 DBHP09172 617 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms