RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ZNF117Q03924 483 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SRSF4Q08170 494 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SPOCK1Q08629 439 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 AIMP2Q13155 320 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 DHRS2Q13268 280 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SMCO1Q147U7 214 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TSC22D1Q15714 1073 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 CD226Q15762 336 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ACKR1Q16570 336 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TUSC1Q2TAM9 212 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PAN3Q58A45 887 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TEX30Q5JUR7 227 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 C1orf100Q5SVJ3 147 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 GLYATL3Q5SZD4 288 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SFRP5Q5T4F7 317 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ATPAF1Q5TC12 328 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 YOD1Q5VVQ6 348 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 DCAF12L2Q5VW00 463 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ELP2Q6IA86 826 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 RTL6Q6ICC9 239 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 OR7E24Q6IFN5 339 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 C11orf87Q6NUJ2 197 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 HAGHLQ6PII5 290 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TFAP2EQ6VUC0 442 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 IL34Q6ZMJ4 242 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 LRRC69Q6ZNQ3 347 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SLC35D2Q76EJ3 337 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 OR2W3Q7Z3T1 314 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PEG10Q86TG7 708 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SLC25A42Q86VD7 318 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 FJX1Q86VR8 437 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 COMMD2Q86X83 199 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ZNF761Q86XN6 746 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 C7orf61Q8IZ16 206 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 CARFQ8N187 725 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ARMC10Q8N2F6 343 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PRSS35Q8N3Z0 413 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 GTPBP8Q8N3Z3 284 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 GALNT16Q8N428 558 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SLC22A24Q8N4F4 322 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ARHGEF39Q8N4T4 335 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 FAM160A2Q8N612 972 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 METTL27Q8N6F8 245 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PNLDC1Q8NA58 520 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PLPP7Q8NBV4 271 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 CLRN3Q8NCR9 226 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TMEM185AQ8NFB2 350 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 OR1M1Q8NGA1 313 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 OR5D14Q8NGL3 314 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 OR2AJ1Q8NGZ0 328 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 OR1S1Q8NH92 325 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ZNF519Q8TB69 540 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 RNF141Q8WVD5 230 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ASB5Q8WWX0 329 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PATE1Q8WXA2 126 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ST8SIA1Q92185 356 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 DCUN1D4Q92564 292 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 FGF14Q92915 247 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 DVL3Q92997 716 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TAAR8Q969N4 342 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 MARC2Q969Z3 335 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 DDIT4LQ96D03 193 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SEH1LQ96EE3 360 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 WDR89Q96FK6 387 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 LRRC46Q96FV0 321 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 MRGPRX1Q96LB2 322 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 CNTNAP3BQ96NU0 1288 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TGM7Q96PF1 710 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TSSK2Q96PF2 358 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ADOQ96SZ5 270 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TSNAXQ99598 290 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 MAP3K3Q99759 626 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 URM1Q9BTM9 101 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ABHD6Q9BV23 337 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 NUDT9Q9BW91 350 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SLC7A5P2Q9GIP4 190 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 CHRNA10Q9GZZ6 450 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ADAM19Q9H013 955 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 NXF5Q9H1B4 397 aaKnown RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 FAM60AQ9NP50 221 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PRMT8Q9NR22 394 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 CUTCQ9NTM9 273 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ASF1BQ9NVP2 202 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 HPF1Q9NWY4 346 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 ANKRD10Q9NXR5 420 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SLC2A8Q9NY64 477 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 RASL12Q9NYN1 266 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 WSB2Q9NYS7 404 aaPredicted RBP3□□□□□ -1.93
HMGN1P18-201ENST00000457642 NDRG3Q9UGV2 375 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 MLXQ9UH92 298 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 MSRAQ9UJ68 235 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 FBXL2Q9UKC9 423 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 OR52A1Q9UKL2 312 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 MMP17Q9ULZ9 603 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 TNFSF18Q9UNG2 199 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 SLC22A13Q9Y226 551 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 PRELID3BQ9Y3B1 194 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 LRP12Q9Y561 859 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 HRH3Q9Y5N1 445 aa3□□□□□ -1.93
HMGN1P18-201ENST00000457642 MYO7AQ13402 2215 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms