RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 AWAT2Q6E213 333 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TMEM184AQ6ZMB5 413 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TRAPPC6BQ86SZ2 158 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 ZNF679Q8IYX0 411 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 JAGN1Q8N5M9 183 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TCEAL7Q9BRU2 100 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 MMP25Q9NPA2 562 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 CYTL1Q9NRR1 136 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 CGGBP1Q9UFW8 167 aaPredicted RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 FAM96BQ9Y3D0 163 aa12.36□□□□□ -0.43
PTPRE-204ENST00000455661 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
PTPRE-204ENST00000455661 TRBV23OR9-2A0A075B6M9 112 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 A0A1W2PP55 124 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 DCDC2BA2VCK2 349 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 GPANK1O95872 356 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 IFNA6P05013 189 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 CSF2RAP15509 400 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 DNASE1L1P49184 302 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 CAV2P51636 162 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 ADPRHP54922 357 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 RPS21P63220 83 aaKnown RBP12.35□□□□□ -0.43
PTPRE-204ENST00000455661 TCEA2Q15560 299 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 MOGAT2Q3SYC2 334 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 FAM76BQ5HYJ3 339 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 ZNF585AQ6P3V2 769 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 VITQ6UXI7 678 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 RTL10Q7L3V2 364 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 FJX1Q86VR8 437 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 PAQR4Q8N4S7 273 aaPredicted RBP12.35□□□□□ -0.43
PTPRE-204ENST00000455661 OR10G6Q8NH81 332 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 FAM174AQ8TBP5 190 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 ASB5Q8WWX0 329 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 PTX4Q96A99 478 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 SLC25A44Q96H78 314 aaPredicted RBP12.35□□□□□ -0.43
PTPRE-204ENST00000455661 LPAR4Q99677 370 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 MICU1Q9BPX6 476 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 APOOQ9BUR5 198 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 NUDT9Q9BW91 350 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 ACKR4Q9NPB9 350 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 NIT2Q9NQR4 276 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 PRMT8Q9NR22 394 aaPredicted RBP12.35□□□□□ -0.43
PTPRE-204ENST00000455661 SPTBP11277 2137 aa12.35□□□□□ -0.43
PTPRE-204ENST00000455661 OTOL1A6NHN0 477 aaPredicted RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 RNASEK-C17orf49H0YIS7 233 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 EFSO43281 561 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 OR2T1O43869 369 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 OR6A2O95222 327 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 SFTA3P0C7M3 94 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 FSTP19883 344 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 S1PR1P21453 382 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 ABCD3P28288 659 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 RAB38P57729 211 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 TAS2R31P59538 309 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 EIF2S3LQ2VIR3 472 aaKnown RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 GAB4Q2WGN9 574 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 ASPHD2Q6ICH7 369 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 SLC18B1Q6NT16 456 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 CORO6Q6QEF8 472 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 ACBD4Q8NC06 268 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 OR4C3Q8NH37 302 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 FLVCR1-AS1Q8TAF5 88 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 NUDCD2Q8WVJ2 157 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 RSC1A1Q92681 617 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 NKD1Q969G9 470 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 ARL5BQ96KC2 179 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 VSTM2LQ96N03 204 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 OR2M4Q96R27 311 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 SLC17A9Q9BYT1 436 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 SEC61A2Q9H9S3 476 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 THAP10Q9P2Z0 257 aaPredicted RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 WIF1Q9Y5W5 379 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 DOCK9Q9BZ29 2069 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 C5orf52A6NGY3 159 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 UBE2CO00762 179 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 XKRYO14609 159 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 MUC1P15941 1255 aaPredicted RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 IGFBP3P17936 291 aaPredicted RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 PAX6P26367 422 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 CCR4P51679 360 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 EIF5AP63241 154 aaKnown RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 TEX30Q5JUR7 227 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 KCTD18Q6PI47 426 aaPredicted RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 ATG4DQ86TL0 474 aaPredicted RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 AQP3Q92482 292 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 HHIPL1Q96JK4 782 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 SPACA7Q96KW9 195 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 RNF126Q9BV68 326 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 SERGEFQ9UGK8 458 aa12.34□□□□□ -0.43
PTPRE-204ENST00000455661 MRPS33Q9Y291 106 aaKnown RBP12.34□□□□□ -0.43
PTPRE-204ENST00000455661 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms