RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ARFRP1Q13795 201 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 ZMYND11Q15326 602 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 SLC36A2Q495M3 483 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 BEX5Q5H9J7 111 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 LCN10Q6JVE6 187 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 PRSS35Q8N3Z0 413 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 FAM109AQ8N4B1 249 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 PTDSS2Q9BVG9 487 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 IFT46Q9NQC8 304 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 SLC22A11Q9NSA0 550 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 C19orf25Q9UFG5 118 aaPredicted RBP10.75□□□□□ -0.69
SMPD4-213ENST00000454468 STEAP1Q9UHE8 339 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 NOP16Q9Y3C1 178 aaKnown RBP10.75□□□□□ -0.69
SMPD4-213ENST00000454468 PLPP3O14495 311 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 CLPSP04118 112 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 HTR2CP28335 458 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 MMP15P51511 669 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 FAM57BQ71RH2 274 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 OR4S1Q8NGB4 309 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 OR4D10Q8NGI6 311 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 OR51E1Q8TCB6 317 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 SLC22A8Q8TCC7 542 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 OR8B4Q96RC9 309 aa10.75□□□□□ -0.69
SMPD4-213ENST00000454468 C13orf42A0A1B0GVH6 325 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 RAB3DO95716 219 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 C1QBP02746 253 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 CD53P19397 219 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 KIR3DL2P43630 455 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 OR3A3P47888 321 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 SLC22A6Q4U2R8 563 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 AWAT2Q6E213 333 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 TCEAL6Q6IPX3 200 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 CDC20BQ86Y33 519 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 FOXRED2Q8IWF2 684 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 ARMC10Q8N2F6 343 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 TCEAL3Q969E4 200 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 SLC25A38Q96DW6 304 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 MSANTD3Q96H12 275 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 SEC22AQ96IW7 307 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 BANF2Q9H503 90 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 LOC101059948A0A1B0GTJ6 334 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 M0R233 179 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 TSPAN2O60636 221 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 ECDO95905 644 aaPredicted RBP10.74□□□□□ -0.69
SMPD4-213ENST00000454468 IGLV3-19P01714 112 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 CALCBP10092 127 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 FOSL1P15407 271 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 DAP3P51398 398 aaKnown RBP10.74□□□□□ -0.69
SMPD4-213ENST00000454468 PLA1AQ53H76 456 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 FAM181AQ8N9Y4 354 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 COQ8AQ8NI60 647 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 CDX2Q99626 313 aaPredicted RBP10.74□□□□□ -0.69
SMPD4-213ENST00000454468 NARFLQ9H6Q4 476 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF160Q9HCG1 818 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 FOXJ3Q9UPW0 622 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
SMPD4-213ENST00000454468 IGKV1D-43A0A0B4J1Z2 117 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 GABARAPH6UMI1 98 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF780AO75290 641 aaPredicted RBP10.74□□□□□ -0.69
SMPD4-213ENST00000454468 MT-ATP6P00846 226 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 AKR1C4P17516 323 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 SELENOPP49908 381 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 SLC25A1P53007 311 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 EPHA4P54764 986 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 NHLRC1Q6VVB1 395 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 BOLLQ8N9W6 283 aaKnown RBP10.74□□□□□ -0.69
SMPD4-213ENST00000454468 JAM3Q9BX67 310 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 SELENOIQ9C0D9 397 aa10.74□□□□□ -0.69
SMPD4-213ENST00000454468 MRPL22Q9NWU5 206 aaKnown RBP10.74□□□□□ -0.69
SMPD4-213ENST00000454468 IGHV5-10-1A0A0J9YXX1 117 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 NPIPA2E9PIF3 369 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 NPIPA3F8WFD2 350 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 PYCARD-AS1I3L0S3 204 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 GPR171O14626 319 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 TP53I11O14683 189 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 RER1O15258 196 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 RPS4XP62701 263 aaKnown RBP10.73□□□□□ -0.69
SMPD4-213ENST00000454468 RHBDD2Q6NTF9 364 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 FAM122CQ6P4D5 195 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 OGFOD3Q6PK18 319 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 BTN2A1Q7KYR7 527 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 OR52N5Q8NH56 324 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 RHBDD1Q8TEB9 315 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 C11orf40Q8WZ69 217 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 DUSP23Q9BVJ7 150 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ARL6Q9H0F7 186 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 EVA1AQ9H8M9 152 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 PCDHGA9Q9Y5G4 932 aaKnown RBP10.73□□□□□ -0.69
SMPD4-213ENST00000454468 HLA-DQB1P01920 261 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 RAB40ALP0C0E4 278 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ABOP16442 354 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 KLK2P20151 261 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 GALP22466 123 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 IL10RAQ13651 578 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 YRDCQ86U90 279 aaKnown RBP10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF584Q8IVC4 421 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ARHGEF39Q8N4T4 335 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 OR4C16Q8NGL9 310 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 LILRB1Q8NHL6 650 aaPredicted RBP10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ZFAND1Q8TCF1 268 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms