RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 NLRC3Q7RTR2 1065 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 LMF2Q9BU23 707 aaKnown RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 TINAGL1Q9GZM7 467 aaPredicted RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 PCOLCE2Q9UKZ9 415 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 NPFFR2Q9Y5X5 522 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 ABCA4P78363 2273 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 IGHV1OR21-1A0A087WYE8 117 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 ZNF432O94892 652 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 ECDO95905 644 aaPredicted RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 GAAP10253 952 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 MMP15P51511 669 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 WDR38Q5JTN6 314 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 ZNF615Q8N8J6 731 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 TRAF4Q9BUZ4 470 aaPredicted RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 SMIM3Q9BZL3 60 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 CA10Q9NS85 328 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 SCP2D1Q9UJQ7 156 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 TCRBV16S1A1N1A0A5B0 115 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 ZNF736B4DX44 427 aaPredicted RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 WDPCPO95876 746 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 PMP2P02689 132 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 CTLA4P16410 223 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 ACHEP22303 614 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 PDCD1Q15116 288 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 METTL11BQ5VVY1 283 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 DMKNQ6E0U4 476 aaPredicted RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 GVQW1Q8N7I0 195 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 OR4C16Q8NGL9 310 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 VSTM2LQ96N03 204 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 VN1R1Q9GZP7 353 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 INPP5EQ9NRR6 644 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 MRM2Q9UI43 246 aaKnown RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 ZNF223Q9UK11 482 aaPredicted RBP10.08□□□□□ -0.8
DDR1-239ENST00000452441 DKKL1Q9UK85 242 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 TMEM14AQ9Y6G1 99 aa10.08□□□□□ -0.8
DDR1-239ENST00000452441 ZNF407Q9C0G0 2248 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 LMX1BO60663 402 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 CRTAPO75718 401 aaPredicted RBP10.07□□□□□ -0.8
DDR1-239ENST00000452441 M6PRP20645 277 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 SDHAP31040 664 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 ACY1Q03154 408 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 ELAVL1Q15717 326 aaKnown RBP10.07□□□□□ -0.8
DDR1-239ENST00000452441 ZNF74Q16587 644 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 RAB12Q6IQ22 244 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 LINC00696Q6ZRV3 163 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 TM4SF19Q96DZ7 209 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 MS4A7Q9GZW8 240 aaPredicted RBP10.07□□□□□ -0.8
DDR1-239ENST00000452441 SLC6A15Q9H2J7 730 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 PARPBPQ9NWS1 579 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 HPF1Q9NWY4 346 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 METTL21EPA6NDL7 271 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 PIN1P1O15428 100 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 TNFSF14O43557 240 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 FOXK1P85037 733 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 ARSKQ6UWY0 536 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 ZNF546Q86UE3 836 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 TMEM17Q86X19 198 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 TOMM40LQ969M1 308 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 SORCS2Q96PQ0 1159 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 TSPAN32Q96QS1 320 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 PTGES2Q9H7Z7 377 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 HEXA-AS1Q9H8Q6 139 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 MEIKINA0A087WXM9 373 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 LINC00862A6NCI5 91 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 AIPO00170 330 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 OR2J2O76002 312 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 HOXB5P09067 269 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 NFYAP23511 347 aaPredicted RBP10.07□□□□□ -0.8
DDR1-239ENST00000452441 NUP62P37198 522 aaPredicted RBP10.07□□□□□ -0.8
DDR1-239ENST00000452441 PPICP45877 212 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 RPS18P62269 152 aaKnown RBP10.07□□□□□ -0.8
DDR1-239ENST00000452441 PUDPQ08623 228 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 VASH2Q86V25 355 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 RTN4RQ9BZR6 473 aa10.07□□□□□ -0.8
DDR1-239ENST00000452441 FAM221AA4D161 298 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 ZNF705EA8MWA4 302 aaPredicted RBP10.06□□□□□ -0.8
DDR1-239ENST00000452441 PRR32B1ATL7 298 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 F5H5P2 479 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 SHOXO15266 292 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 SULT1A3P0DMM9 295 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 SULT1A4P0DMN0 295 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 AVPR2P30518 371 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 CCL7P80098 99 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 AANATQ16613 207 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 C1orf140Q5VVS0 124 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 STEAP1BQ6NZ63 245 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 FAM57BQ71RH2 274 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 PXKQ7Z7A4 578 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 TREM1Q9NP99 234 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 A6NCN8 305 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 GNB3P16520 340 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 SERPINA2P20848 420 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 HTR2CP28335 458 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 FXYD4P59646 89 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 ZP1P60852 638 aa10.06□□□□□ -0.8
DDR1-239ENST00000452441 IL13RA1P78552 427 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms