RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RTP3Q9BQQ7 232 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 LHX3Q9UBR4 397 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 TCFL5Q9UL49 500 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 LSM2Q9Y333 95 aaKnown RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 PMP2P02689 132 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 LIMK1P53667 647 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 SLC35A1P78382 337 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ELAVL3Q14576 367 aaKnown RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 OR5M10Q6IEU7 315 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 RBPMS2Q6ZRY4 209 aaKnown RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF519Q8TB69 540 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ZFPM2Q8WW38 1151 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM106AQ96A25 262 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF426Q9BUY5 554 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 SLX4Q8IY92 1834 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 RNASET2O00584 256 aaKnown RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 MCHR2Q969V1 340 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 PEX11GQ96HA9 241 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ISLRO14498 428 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ZFAND5O76080 213 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 HAND1O96004 215 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 NDUFB7P17568 137 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 AHRP35869 848 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 DDOSTP39656 456 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 RAD52P43351 418 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 IGSF11Q5DX21 431 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM88Q6PEY1 159 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 LRFN3Q9BTN0 628 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 SLC7A10Q9NS82 523 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 UGGT1Q9NYU2 1555 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 TRPM1Q7Z4N2 1603 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 FAHP16930 419 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 FAM3AP98173 230 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 RIGQ13278 110 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 MBTPS1Q14703 1052 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ENTPD8Q5MY95 495 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ADAMTS13Q76LX8 1427 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 CLDN34H7C241 214 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 C4BPAP04003 597 aaKnown RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 NQO2P16083 231 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 TOMM34Q15785 309 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 MS4A13Q5J8X5 152 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF691Q5VV52 312 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 SYT9Q86SS6 491 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 C17orf78Q8N4C9 275 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM102Q8N9M5 508 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ENTPD2Q9Y5L3 495 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ADAM20O43506 726 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 SELENOFO60613 162 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 AQP8O94778 261 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 TYMSP04818 313 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 ATP1B1P05026 303 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 ADPRMQ3LIE5 342 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 C19orf54Q5BKX5 351 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 OR7E24Q6IFN5 339 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 PLXDC2Q6UX71 529 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 Q6ZVU0 165 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 ANGPTL5Q86XS5 388 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 GPR150Q8NGU9 434 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 KHSRPQ92945 711 aaKnown RBP eCLIP8.24□□□□□ -1.092e-6■■■■□ 21.3
NIPBL-202ENST00000448238 STARD4Q96DR4 205 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 PLAGL1Q9UM63 463 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 DUXBA0A1W2PPF3 345 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 SLC35E2BP0CK96 405 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 ACRV1P26436 265 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 OR10J1P30954 320 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 RABIFP47224 123 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 NOGQ13253 232 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 FZD2Q14332 565 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 LKAAEAR1Q8TD35 194 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM37Q8WXS4 190 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 CNIH4Q9P003 139 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 BAZ2AQ9UIF9 1905 aaKnown RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 LNP1A1A4G5 178 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 HOXC11O43248 304 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 ALDOCP09972 364 aaKnown RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 EIF1P41567 113 aaKnown RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 SSBP1Q04837 148 aaKnown RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 TRMT12Q53H54 448 aaKnown RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM268Q5VZI3 342 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 CST9Q5W186 159 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 CLDN19Q8N6F1 224 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 SLC35B2Q8TB61 432 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 LGALS14Q8TCE9 139 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 NETO1Q8TDF5 533 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM56Q96MV1 263 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 SYT17Q9BSW7 474 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 OR52D1Q9H346 318 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 DDX31Q9H8H2 851 aaKnown RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 CNTD2Q9H8S5 307 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 KCND3Q9UK17 655 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 ABCC3O15438 1527 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 SLC17A3O00476 420 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 BCAT2O15382 392 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-202ENST00000448238 QDPRP09417 244 aa8.24□□□□□ -1.09
NIPBL-202ENST00000448238 PPP1CCP36873 323 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms