RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 BARHL1Q9BZE3 327 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ZDHHC5Q9C0B5 715 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PLEKHA2Q9HB19 425 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 FGF20Q9NP95 211 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TM7SF3Q9NS93 570 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 B3GAT1Q9P2W7 334 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 COL16A1Q07092 1604 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 M0R082 166 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 SPINT2O43291 252 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TMPRSS11DO60235 418 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 IGHEP01854 428 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 DUSP8Q13202 625 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 SELENBP1Q13228 472 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 SYT13Q7L8C5 426 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PLPP6Q8IY26 295 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 OR51H1Q8NH63 302 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 WFDC5Q8TCV5 224 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 EMG1Q92979 244 aaKnown RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 FAM234AQ9H0X4 552 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 MOB1AQ9H8S9 216 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 FN3KRPQ9HA64 309 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TNFRSF12AQ9NP84 129 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF331Q9NQX6 463 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 MARCH5Q9NX47 278 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 FLVCR2Q9UPI3 526 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 FLVCR1Q9Y5Y0 555 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 HSPB2A8KAH6 182 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF587BE7ETH6 402 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 H3BQ06 376 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 DCTN6O00399 190 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 OR4E1P0C645 316 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TBPP20226 339 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PRPH2P23942 346 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ARRB2P32121 409 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 P2RX1P51575 399 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 P2RX3P56373 397 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 UBE2MP61081 183 aaKnown RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 HSPB2Q16082 182 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 RNF212Q495C1 297 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PDZD11Q5EBL8 140 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 IL34Q6ZMJ4 242 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PTOV1Q86YD1 416 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 SLC35G3Q8N808 338 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ASB13Q8WXK3 278 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 THAP10Q9P2Z0 257 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 C5P01031 1676 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 PRAMEF25A6NGN4 478 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 HSD17B6O14756 317 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 CYTIPO60759 359 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 NXPH3O95157 252 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ZIC2O95409 532 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TPOP07202 933 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 CD37P11049 281 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 CPN1P15169 458 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 RPL12P30050 165 aaKnown RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 RBP2P50120 134 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 OR10A3P58181 314 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 OR2B8PP59922 312 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 CTF1Q16619 201 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 AFMIDQ63HM1 303 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TFAP2EQ6VUC0 442 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 CATSPERDQ86XM0 798 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 MAML2Q8IZL2 1156 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ARIH2OSQ8N7S6 290 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 SLC38A9Q8NBW4 561 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 CMTM2Q8TAZ6 248 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF2Q9BSG1 426 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM231Q9H6L2 316 aa7.11□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF727A8MUV8 499 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 TRAF3IP2O43734 574 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM127O75204 238 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 OR8U8P0C7N1 319 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 METTL15P1P0C7V9 234 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 FKBP2P26885 142 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 EPHA2P29317 976 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 APOBEC1P41238 236 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 FABP6P51161 128 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 GPR85P60893 370 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SNRPNP63162 240 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ENDOGQ14249 297 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ELAVL1Q15717 326 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 FBXO46Q6PJ61 603 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 OR10J5Q8NHC4 309 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 GOT1L1Q8NHS2 421 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 PHOSPHO2Q8TCD6 241 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ST8SIA2Q92186 375 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 UCN3Q969E3 161 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 TOX2Q96NM4 488 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 NRSN2Q9GZP1 204 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF768Q9H5H4 540 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 PLSCR3Q9NRY6 295 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 PISDQ9UG56 409 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 RNF150Q9ULK6 438 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SSUH2Q9Y2M2 353 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 PLCH1Q4KWH8 1693 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 TARM1B6A8C7 271 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 E5RGE8 158 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 G3V3Y1 287 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 TO15178 435 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 BCAT2O15382 392 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms