RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 CD34P28906 385 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GNMTQ14749 295 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 MEF2DQ14814 521 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SHBQ15464 509 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SOWAHCQ53LP3 525 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TMPRSS7Q7RTY8 843 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 APOBEC4Q8WW27 367 aaKnown RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 RRNAD1Q96FB5 475 aaKnown RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CITED4Q96RK1 184 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SIGLEC11Q96RL6 698 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ZNF71Q9NQZ8 489 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 MCRIP1C9JLW8 97 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 HSPB6O14558 160 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TOXO94900 526 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 NXPH2O95156 264 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 RPS19P39019 145 aaKnown RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR2A2Q6IF42 318 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 EIF5AL1Q6IS14 154 aaKnown RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TMEM81Q6P7N7 255 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 METAP1DQ6UB28 335 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ANGPTL5Q86XS5 388 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR8H3Q8N146 312 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TMEM105Q8N8V8 129 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SNAPC3Q92966 411 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 MOGAT1Q96PD6 335 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 PRRT1Q99946 306 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ABHD6Q9BV23 337 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 MMP28Q9H239 520 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SLC6A15Q9H2J7 730 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GPR84Q9NQS5 396 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 FKBP14Q9NWM8 211 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SLCO1C1Q9NYB5 712 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 FLRT3Q9NZU0 649 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 NYNRINQ9P2P1 1898 aaKnown RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GALR2O43603 387 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SLC34A2O95436 690 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GRPP07492 148 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CTSBP07858 339 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CCL3P10147 92 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TAS2R19P59542 299 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 USP51Q70EK9 711 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TRILQ7L0X0 811 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GCDHQ92947 438 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 RNF170Q96K19 258 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 FOXB1Q99853 325 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 RNF167Q9H6Y7 350 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ISG20L2Q9H9L3 353 aaKnown RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GPR173Q9NS66 373 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 NDUFB11Q9NX14 153 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TAS2R4Q9NYW5 299 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SLC22A13Q9Y226 551 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CHST2Q9Y4C5 530 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ASXL3Q9C0F0 2248 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR2M5A3KFT3 312 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CDC42EP2O14613 210 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ARPC3O15145 178 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 MT-ND4P03905 459 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 RAF1P04049 648 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SOX18P35713 384 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CDK5R1Q15078 307 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 PPA1Q15181 289 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GRK1Q15835 563 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 GLIPR1L1Q6UWM5 242 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR6F1Q8NGZ6 308 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 FAM117AQ9C073 453 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 TBCCD1Q9NVR7 557 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 B3GAT1Q9P2W7 334 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 MGAT4AQ9UM21 535 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 RCE1Q9Y256 329 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ETV7Q9Y603 341 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SLCO1B1Q9Y6L6 691 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 R4GMQ9 66 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 EP300Q09472 2414 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SPTA1P02549 2419 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 PIGBOS1A0A0B4J2F0 54 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 LOC100289279A0A1B0GTE1 492 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 C4orf51C9J302 202 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 HYAL3O43820 417 aaPredicted RBP6.66□□□□□ -1.34
SYNE1-213ENST00000448038 GPX5O75715 221 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 CRYAAP02489 173 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 C1QCP02747 245 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 CYC1P08574 325 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 CPT2P23786 658 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 IL2RGP31785 369 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 GSG1LQ6UXU4 331 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 THSD4Q6ZMP0 1018 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 CFAP77Q6ZQR2 320 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 SGPP2Q8IWX5 399 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 OR52H1Q8NGJ2 320 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 GRPEL2Q8TAA5 225 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 ABHD5Q8WTS1 349 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 SMIM19Q96E16 107 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
SYNE1-213ENST00000448038 MED18Q9BUE0 208 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 SLCO5A1Q9H2Y9 848 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 CPNE5Q9HCH3 593 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 ISYNA1Q9NPH2 558 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 DECR2Q9NUI1 292 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 NUBP2Q9Y5Y2 271 aa6.66□□□□□ -1.34
SYNE1-213ENST00000448038 CNOT1A5YKK6 2376 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms