RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 AKR7A3O95154 331 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 GYPBP06028 91 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 ADRA2AP08913 450 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 FGF2P09038 288 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 CLUP10909 449 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 PTBP1P26599 531 aaKnown RBP eCLIP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 CDKN2AP42771 156 aaKnown RBP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 RPL27P61353 136 aaKnown RBP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 PON3Q15166 354 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 B3GLCTQ6Y288 498 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 SHFQ7M4L6 423 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 KDM8Q8N371 416 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 FDCSPQ8NFU4 85 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 OR51G2Q8NGK0 314 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 MIB2Q96AX9 1013 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 SFXN2Q96NB2 322 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 DDOQ99489 341 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 SLC30A2Q9BRI3 323 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 C14orf119Q9NWQ9 140 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 RDH8Q9NYR8 311 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 EXOGQ9Y2C4 368 aaKnown RBP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 EXOSC1Q9Y3B2 195 aaKnown RBP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 SESN1Q9Y6P5 492 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 V9GYH0 126 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 MS4A18H0YCH9 400 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 H7C2Y5 167 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 SLC31A2O15432 143 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 NME2P1O60361 137 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 RENP00797 406 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 NME2P22392 152 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 SLC2A5P22732 501 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 DIO1P49895 249 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 RRAS2P62070 204 aaPredicted RBP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 SLC35A1P78382 337 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 C1DQ13901 141 aaKnown RBP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 MED22Q15528 200 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 MS4A18Q3C1V0 323 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 MESTQ5EB52 335 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 ZNF367Q7RTV3 350 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 ADPRHL1Q8NDY3 354 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 PROKR2Q8NFJ6 384 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 OR4F15Q8NGB8 312 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 CPNE4Q96A23 557 aaPredicted RBP7.23□□□□□ -1.25
CCDC39-201ENST00000442201 WDFY2Q96P53 400 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 NMNAT2Q9BZQ4 307 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 HAO2Q9NYQ3 351 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 CLEC2DQ9UHP7 191 aa7.23□□□□□ -1.25
CCDC39-201ENST00000442201 CNTRLQ7Z7A1 2325 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 A0A1W2PPL8 197 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 PMS2P2O95744 297 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 ACVR1BP36896 505 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 VEGFCP49767 419 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 DAP3P51398 398 aaKnown RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SLC25A1P53007 311 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 B3GALT5-AS1P59052 145 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 PLGLB1Q02325 96 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 POU4F2Q12837 409 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 TIGD6Q17RP2 521 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SWI5Q1ZZU3 235 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SLC35D3Q5M8T2 416 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 WIPI1Q5MNZ9 446 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 LCN1P1Q5VSP4 162 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 C16orf54Q6UWD8 224 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SEZ6L2Q6UXD5 910 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 PXKQ7Z7A4 578 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 TMEM99Q8N816 258 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 TMEM178AQ8NBL3 297 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SLC39A7Q92504 469 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 KISS1RQ969F8 398 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 ZNF703Q9H7S9 590 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 ASB6Q9NWX5 421 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 PCNX3Q9H6A9 2034 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SPTBN2O15020 2390 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 DOCK10Q96BY6 2186 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 TRBV23-1A0A0A0MS06 115 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 A0A1W2PNV4 684 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 NPIPB13A6NJU9 1138 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 NPIPB4C9JG80 1138 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 NPIPA5E9PKD4 350 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 EFSO43281 561 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 TLX3O43711 291 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 IGHMP01871 453 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 FAM157BP0CG42 384 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 RFC3P40938 356 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 CSNK2A1P68400 391 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 HSF1Q00613 529 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 POU3F1Q03052 451 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SPHARQ15513 63 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 ZNF766Q5HY98 468 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 TMEM225Q6GV28 225 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 RGS7BPQ6MZT1 257 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 PAQR6Q6TCH4 344 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 ACBD7Q8N6N7 88 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 NANOGP1Q8N7R0 232 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 OR51L1Q8NGJ5 315 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 OR2T4Q8NH00 348 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SNIP1Q8TAD8 396 aaKnown RBP7.22□□□□□ -1.25
CCDC39-201ENST00000442201 ZPLD1Q8TCW7 415 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 TTTY12Q9BZ98 90 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 SRRQ9GZT4 340 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms