RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 GGNQ86UU5 652 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 NKAIN3Q8N8D7 197 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 C15orf40Q8WUR7 153 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 RAB40AQ8WXH6 277 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 ITPKCQ96DU7 683 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 ZC3HAV1LQ96H79 300 aaKnown RBP11.7□□□□□ -0.54
CPSF4-206ENST00000441580 ADGRG7Q96K78 797 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 GFI1Q99684 422 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 SRXN1Q9BYN0 137 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 IRF2BPLQ9H1B7 796 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 DEPPQ9NTK1 212 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 NPAP1Q9NZP6 1156 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 IL17BQ9UHF5 180 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 EMC9Q9Y3B6 208 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 PCDHGA9Q9Y5G4 932 aaKnown RBP11.7□□□□□ -0.54
CPSF4-206ENST00000441580 A0A0G2JMP0 313 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 A0A0X1KG70 313 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 A0A1B0GTH9 108 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 TMEM269A0A1B0GVZ9 245 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 CTDSPLO15194 276 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 SMAD9O15198 467 aaKnown RBP11.69□□□□□ -0.54
CPSF4-206ENST00000441580 PAHP00439 452 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 PNPP00491 289 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 HPNP05981 417 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 LIPCP11150 499 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 HSD11B1P28845 292 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 CD96P40200 585 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 RANBP1P43487 201 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 CAPZA1P52907 286 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 MRPS10P82664 201 aaKnown RBP11.69□□□□□ -0.54
CPSF4-206ENST00000441580 FOXO1Q12778 655 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 HES5Q5TA89 166 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 NRARPQ7Z6K4 114 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 DTX1Q86Y01 620 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 OR4M2Q8NGB6 313 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 OR13C3Q8NGS6 347 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 OR5H6Q8NGV6 325 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 OR10AC1Q8NH08 325 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 CHAC2Q8WUX2 184 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 TRIM63Q969Q1 353 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 ULBP2Q9BZM5 246 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 C11orf54Q9H0W9 315 aaPredicted RBP11.69□□□□□ -0.54
CPSF4-206ENST00000441580 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 SEC61A2Q9H9S3 476 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 LIN7BQ9HAP6 207 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 G6PC2Q9NQR9 355 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 CENPMQ9NSP4 180 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 FAM206AQ9NX38 181 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 STEAP1Q9UHE8 339 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 NUFIP1Q9UHK0 495 aaKnown RBP11.69□□□□□ -0.54
CPSF4-206ENST00000441580 FBXL3Q9UKT7 428 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 CAMK2AQ9UQM7 478 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 SLC22A13Q9Y226 551 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 LHFPL6Q9Y693 200 aa11.69□□□□□ -0.54
CPSF4-206ENST00000441580 FREM3P0C091 2139 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 LAMA1P25391 3075 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 A0A087WV48 116 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 MEGF11A6BM72 1044 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 LYRM1O43325 122 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 GSTZ1O43708 216 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 NME2P1O60361 137 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 TRAPPC6AO75865 159 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 SPNP16150 400 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 KLK2P20151 261 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 CSRP1P21291 193 aaKnown RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 NME2P22392 152 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 MNDAP41218 407 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 RFX2P48378 723 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 GFRA1P56159 465 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 CARD18P57730 90 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 TCF15Q12870 199 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 TAF13Q15543 124 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 WIPI1Q5MNZ9 446 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 OTPQ5XKR4 325 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 GLT8D1Q68CQ7 371 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 SYT9Q86SS6 491 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 C20orf196Q8IYI0 205 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 CADM3Q8N126 398 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 PRSS33Q8NF86 280 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 OR51A4Q8NGJ6 313 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 C7orf50Q9BRJ6 194 aaKnown RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 HDHD2Q9H0R4 259 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 ABCG5Q9H222 651 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 EMC7Q9NPA0 242 aa11.68□□□□□ -0.54
CPSF4-206ENST00000441580 DDX28Q9NUL7 540 aaKnown RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 RBFOX1Q9NWB1 397 aaKnown RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 PAQR5Q9NXK6 330 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 FOXD3Q9UJU5 478 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-206ENST00000441580 BDP1A6H8Y1 2624 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 TRAV8-7A0A075B6U6 113 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 IGHV3-15A0A0B4J1V0 119 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 SPAARA0A1B0GVQ0 90 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 PINLYPA6NC86 204 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 OR5H15A6NDH6 313 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 DHHO43323 396 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 SULT1B1O43704 296 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 WDPCPO95876 746 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 RFPL3SP0C7P2 107 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms