RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 WNT5AP41221 380 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 HTR5AP47898 357 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 GDI2P50395 445 aaKnown RBP15.54■□□□□ 0.08
CPSF4-205ENST00000440514 ERVS71-1P61550 626 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 SNRPD2P62316 118 aaKnown RBP15.54■□□□□ 0.08
CPSF4-205ENST00000440514 EFNB3Q15768 340 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 ACSM5Q6NUN0 579 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 SLC27A4Q6P1M0 643 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 VASH1Q7L8A9 365 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-205ENST00000440514 TGIF2LYQ8IUE0 185 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 ZDHHC13Q8IUH4 622 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 OR10H5Q8NGA6 315 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 OR51L1Q8NGJ5 315 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 OR2T4Q8NH00 348 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 TRMT61AQ96FX7 289 aaKnown RBP15.54■□□□□ 0.08
CPSF4-205ENST00000440514 HCAR1Q9BXC0 346 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 MRPL37Q9BZE1 423 aaKnown RBP15.54■□□□□ 0.08
CPSF4-205ENST00000440514 NMNAT2Q9BZQ4 307 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 GABARAPL1Q9H0R8 117 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 MED20Q9H944 212 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 PAPOLBQ9NRJ5 636 aaKnown RBP15.54■□□□□ 0.08
CPSF4-205ENST00000440514 FZR1Q9UM11 496 aa15.54■□□□□ 0.08
CPSF4-205ENST00000440514 TVP23AA6NH52 213 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 SAC3D1A6NKF1 404 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 FAM183AA6NL82 134 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 VSTM5A8MXK1 200 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 H7C417 338 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 RER1O15258 196 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 MITFO75030 526 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-205ENST00000440514 ZNF3P17036 446 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 SPI1P17947 270 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 GLRXP35754 106 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 RPS23P62266 143 aaKnown RBP15.53■□□□□ 0.08
CPSF4-205ENST00000440514 TEKQ02763 1124 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 SHEQ5VZ18 495 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 TMEM236Q5W0B7 351 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 CORO6Q6QEF8 472 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 RFPL4BQ6ZWI9 263 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 LINC00346Q8IVM7 164 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 ALDH16A1Q8IZ83 802 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 ZNF101Q8IZC7 436 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 ICA1LQ8NDH6 482 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 PKP2Q99959 881 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 SYT3Q9BQG1 590 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 PLK3Q9H4B4 646 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 MRPL22Q9NWU5 206 aaKnown RBP15.53■□□□□ 0.08
CPSF4-205ENST00000440514 PLEK2Q9NYT0 353 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 OAZ3Q9UMX2 235 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 CMAHPQ9Y471 501 aa15.53■□□□□ 0.08
CPSF4-205ENST00000440514 TMEM129A0AVI4 362 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 B9A039 149 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 LCKP06239 509 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 PSKH1P11801 424 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 CCDC92Q53HC0 331 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-205ENST00000440514 LRP11Q86VZ4 500 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 LURAP1LQ8IV03 231 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 SLC7A6Q92536 515 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 MRPL24Q96A35 216 aaKnown RBP15.52■□□□□ 0.08
CPSF4-205ENST00000440514 CENPNQ96H22 339 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-205ENST00000440514 Q96MF0 132 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 SLC25A19Q9HC21 320 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 KRT84Q9NSB2 600 aa15.52■□□□□ 0.08
CPSF4-205ENST00000440514 MYEF2Q9P2K5 600 aaKnown RBP15.52■□□□□ 0.08
CPSF4-205ENST00000440514 ARFGEF3Q5TH69 2177 aa15.52■□□□□ 0.07
CPSF4-205ENST00000440514 SYNGR3O43761 229 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 GGT2P36268 569 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 RPS27P42677 84 aaKnown RBP15.51■□□□□ 0.07
CPSF4-205ENST00000440514 SLC25A1P53007 311 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 CRISP1P54107 249 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 UCP2P55851 309 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 HIST1H3AP68431 136 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 CDK5Q00535 292 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 RAB35Q15286 201 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 ZSCAN26Q16670 478 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 HIST2H3PS2Q5TEC6 136 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 RGS7BPQ6MZT1 257 aaPredicted RBP15.51■□□□□ 0.07
CPSF4-205ENST00000440514 CFAP77Q6ZQR2 320 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 HIST2H3AQ71DI3 136 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 PARP8Q8N3A8 854 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 STMN2Q93045 179 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 OTULINQ96BN8 352 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 PRRG3Q9BZD7 231 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 NDRG4Q9ULP0 352 aaKnown RBP15.51■□□□□ 0.07
CPSF4-205ENST00000440514 COMMD3-BMI1R4GMX3 469 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 PMF1-BGLAPU3KQ54 211 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 ITPR3Q14573 2671 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 F8P00451 2351 aa15.51■□□□□ 0.07
CPSF4-205ENST00000440514 OR6C6A6NF89 314 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 SURF4O15260 269 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 COX5BP10606 129 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 BMP4P12644 408 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 PCSK6P29122 969 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 MAD2L1BPQ15013 274 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-205ENST00000440514 SPATA46Q5T0L3 261 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 KDM4DQ6B0I6 523 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 SLC18B1Q6NT16 456 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 PRSS57Q6UWY2 283 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 UNQ6126/PRO20091Q6UXV3 157 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 ZNF511Q8NB15 262 aa15.5■□□□□ 0.07
CPSF4-205ENST00000440514 OR1J1Q8NGS3 322 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms