RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 TAAR1Q96RJ0 339 aa2.21□□□□□ -2.06
VPS41-207ENST00000439468 OSBPL10Q9BXB5 764 aa2.21□□□□□ -2.06
VPS41-207ENST00000439468 KCNJ16Q9NPI9 418 aa2.21□□□□□ -2.06
VPS41-207ENST00000439468 PITPNC1Q9UKF7 332 aa2.21□□□□□ -2.06
VPS41-207ENST00000439468 WNK3Q9BYP7 1800 aa2.21□□□□□ -2.06
VPS41-207ENST00000439468 NSD2O96028 1365 aa2.21□□□□□ -2.06
VPS41-207ENST00000439468 TMEM2Q9UHN6 1383 aa2.21□□□□□ -2.06
VPS41-207ENST00000439468 RANBP2P49792 3224 aaKnown RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 PRUNE2Q8WUY3 3088 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ZNF816-ZNF321PA0A0X1KG74 233 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 TEX46H3BTG2 121 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 DNALI1O14645 258 aaPredicted RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 SOX15O60248 233 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 CLPXO76031 633 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 AIFM1O95831 613 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 C6orf47O95873 294 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 BGLAPP02818 100 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ZNF24P17028 368 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ZNF32P17041 273 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 AK4P27144 223 aaPredicted RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 HRH1P35367 487 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 SLC7A9P82251 487 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 HMGCS1Q01581 520 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 CUL2Q13617 745 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 GGTLC2Q14390 218 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ARHGAP19Q14CB8 494 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 TTLL9Q3SXZ7 439 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 KHDRBS2Q5VWX1 349 aaKnown RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 LRRC66Q68CR7 880 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 TTC5Q8N0Z6 440 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 GTPBP8Q8N3Z3 284 aaPredicted RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 LIX1Q8N485 282 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 MREGQ8N565 214 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 Q8N976 141 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 Q8N9L7 120 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 CXorf40AQ8TE69 158 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ZFP90Q8TF47 636 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 WFIKKN1Q96NZ8 548 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 OR5B12Q96R08 314 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 KCTD14Q9BQ13 255 aaPredicted RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 FAM192AQ9GZU8 254 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 RACGAP1Q9H0H5 632 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 DCAF16Q9NXF7 216 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ING4Q9UNL4 249 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ST3GAL6Q9Y274 331 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 PIK3C2AO00443 1686 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 GCC2Q8IWJ2 1684 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 AKAP12Q02952 1782 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 COL14A1Q05707 1796 aaKnown RBP2.2□□□□□ -2.06
VPS41-207ENST00000439468 ADGRL2O95490 1459 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 C1orf167Q5SNV9 1468 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ITSN1Q15811 1721 aa2.2□□□□□ -2.06
VPS41-207ENST00000439468 ARHGEF5Q12774 1597 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 ARFGEF1Q9Y6D6 1849 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 LAMA3Q16787 3333 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 ADGRL3Q9HAR2 1447 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 RBBP6Q7Z6E9 1792 aaKnown RBP2.19□□□□□ -2.06
VPS41-207ENST00000439468 KCPQ6ZWJ8 1503 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 TRIOBPQ9H2D6 2365 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.19□□□□□ -2.06
VPS41-207ENST00000439468 LRRIQ3A6PVS8 624 aaPredicted RBP2.19□□□□□ -2.06
VPS41-207ENST00000439468 XKRYO14609 159 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 DPM1O60762 260 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 EEDO75530 441 aaKnown RBP2.19□□□□□ -2.06
VPS41-207ENST00000439468 SERPINA5P05154 406 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 TLX1NBP0CAT3 122 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 PRPS2P11908 318 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 MAS1LP35410 378 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 AQP2P41181 271 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 NAA10P41227 235 aaPredicted RBP2.19□□□□□ -2.06
VPS41-207ENST00000439468 PPOXP50336 477 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 RND2P52198 227 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 UGT2B15P54855 530 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 CCNA1P78396 465 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 SLC25A11Q02978 314 aaKnown RBP2.19□□□□□ -2.06
VPS41-207ENST00000439468 POU2AF1Q16633 256 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 PPM1LQ5SGD2 360 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 TSPO2Q5TGU0 170 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 AGBL2Q5U5Z8 902 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 IGFL3Q6UXB1 125 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 ZFP2Q6ZN57 461 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 ZNF493Q6ZR52 646 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 STRADAQ7RTN6 431 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 PDIK1LQ8N165 341 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 BBS5Q8N3I7 341 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 OR10R2Q8NGX6 335 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 ZNF596Q8TC21 504 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 GPR151Q8TDV0 419 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 FAM3DQ96BQ1 224 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 TSSK3Q96PN8 268 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 P2RX4Q99571 388 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 ECSITQ9BQ95 431 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 MRPL37Q9BZE1 423 aaKnown RBP2.19□□□□□ -2.06
VPS41-207ENST00000439468 TPK1Q9H3S4 243 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 VANGL2Q9ULK5 521 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 PSG8Q9UQ74 426 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 LRRC37A3O60309 1634 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 TIAM2Q8IVF5 1701 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms