RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 NDRG4Q9ULP0 352 aaKnown RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 TIMM10BQ9Y5J6 103 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 CUBNO60494 3623 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 YLPM1P49750 1951 aaKnown RBP6.59□□□□□ -1.35
VPS50-204ENST00000438395 ZSCAN5BA6NJL1 495 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 MRASO14807 208 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 SURF4O15260 269 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 FOXH1O75593 365 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 IGF2P01344 180 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 IGHV1-46P01743 117 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 THY1P04216 161 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 IFNW1P05000 195 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 CST2P09228 141 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 MMP7P09237 267 aaPredicted RBP6.59□□□□□ -1.35
VPS50-204ENST00000438395 IFI30P13284 250 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 ADRA2CP18825 462 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 LAP3P28838 519 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 MPV17P39210 176 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 OR1E2P47887 323 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 HTR5AP47898 357 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 RPL27P61353 136 aaKnown RBP6.59□□□□□ -1.35
VPS50-204ENST00000438395 SCRN3Q0VDG4 424 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 HIST3H3Q16695 136 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 CYBRD1Q53TN4 286 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 TTMPQ5BVD1 217 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 ARMC4Q5T2S8 1044 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 FAM27BQ5VT28 67 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
VPS50-204ENST00000438395 NANOGP8Q6NSW7 305 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 RFPL4BQ6ZWI9 263 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 RRM2BQ7LG56 351 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 OAFQ86UD1 273 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 NKAIN4Q8IVV8 208 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 ZNF101Q8IZC7 436 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 KLHL36Q8N4N3 616 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 PCYOX1LQ8NBM8 494 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 SLC25A40Q8TBP6 338 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 GTF3AQ92664 365 aaKnown RBP6.59□□□□□ -1.35
VPS50-204ENST00000438395 LRRC58Q96CX6 371 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 BPIFA2Q96DR5 249 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 POM121L2Q96KW2 1035 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 PRRC1Q96M27 445 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 SEPHS2Q99611 448 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 PRSS27Q9BQR3 290 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 FNDC11Q9BVV2 318 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 OR2J1Q9GZK6 312 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 G6PC2Q9NQR9 355 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 C20orf141Q9NUB4 165 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 ARGLU1Q9NWB6 273 aaPredicted RBP6.59□□□□□ -1.35
VPS50-204ENST00000438395 GID8Q9NWU2 228 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 POLR1DQ9Y2S0 133 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 CACNG2Q9Y698 323 aa6.59□□□□□ -1.35
VPS50-204ENST00000438395 WNK2Q9Y3S1 2297 aa6.59□□□□□ -1.36
VPS50-204ENST00000438395 LOC100509620A0A075B734 347 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 EFCAB9A8MZ26 197 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 GSTA4O15217 222 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 DOK2O60496 412 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 EDF1O60869 148 aaKnown RBP6.58□□□□□ -1.36
VPS50-204ENST00000438395 PRSS23O95084 383 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 NPPAP01160 153 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 SBK2P0C263 348 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 TNFRSF1AP19438 455 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 WNT5AP41221 380 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 CTXN1P60606 82 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 PSG4Q00888 419 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 ANKDD1AQ495B1 522 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 ESCO2Q56NI9 601 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 MTX3Q5HYI7 312 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 COQ5Q5HYK3 327 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 ZNF774Q6NX45 483 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 ZNF730Q6ZMV8 503 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 HDXQ7Z353 690 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 ARPINQ7Z6K5 226 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 IGFN1Q86VF2 1251 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 TSPYL5Q86VY4 417 aaPredicted RBP6.58□□□□□ -1.36
VPS50-204ENST00000438395 CYP4Z1Q86W10 505 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 MICU2Q8IYU8 434 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 OR2T12Q8NG77 320 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 LIPHQ8WWY8 451 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 GEMIN6Q8WXD5 167 aaKnown RBP6.58□□□□□ -1.36
VPS50-204ENST00000438395 HDAC2Q92769 488 aaKnown RBP6.58□□□□□ -1.36
VPS50-204ENST00000438395 NABP1Q96AH0 204 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 MARS2Q96GW9 593 aaKnown RBP6.58□□□□□ -1.36
VPS50-204ENST00000438395 C4orf45Q96LM5 186 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 COG8Q96MW5 612 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 DCLRE1CQ96SD1 692 aaKnown RBP6.58□□□□□ -1.36
VPS50-204ENST00000438395 MRI1Q9BV20 369 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 TMEM120AQ9BXJ8 343 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 WNT5BQ9H1J7 359 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 NTN4Q9HB63 628 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 MSL2Q9HCI7 577 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 MAN2C1Q9NTJ4 1040 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 GRHPRQ9UBQ7 328 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 OR5V1Q9UGF6 321 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 UGT2A1Q9Y4X1 527 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 U3KQE9 123 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 SVEP1Q4LDE5 3571 aa6.58□□□□□ -1.36
VPS50-204ENST00000438395 TRAV27A0A087WT01 109 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms