RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FAM3CQ92520 227 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 HLA-CQ95604 372 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 LIN37Q96GY3 246 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF334Q9HCZ1 680 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 COA4Q9NYJ1 87 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 MPC1Q9Y5U8 109 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 IGFBP1P08833 259 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 FGF2P09038 288 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CST2P09228 141 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 IL3RAP26951 378 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZFP36L2P47974 494 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 HSF1Q00613 529 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 C2orf27AQ580R0 203 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 LRRC73Q5JTD7 316 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CLEC12AQ5QGZ9 265 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF565Q8N9K5 539 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR52N5Q8NH56 324 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR5AK3PQ8NH89 298 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 LMX1AQ8TE12 382 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CCDC74AQ96AQ1 378 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 IFT22Q9H7X7 185 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 WSB2Q9NYS7 404 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM269A0A1B0GVZ9 245 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 A0A1W2PPH5 198 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 A6NCN8 305 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 LRRC30A6NM36 301 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 EEF1E1O43324 174 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OIP5O43482 229 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 HLA-HP01893 362 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 MBPP02686 304 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CNR1P21554 472 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 TNFSF4P23510 183 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 FPR2P25090 351 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF81P51508 661 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 RAB4BP61018 213 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 GABREP78334 506 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 FGL2Q14314 439 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 NRARPQ7Z6K4 114 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CA13Q8N1Q1 262 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR14K1Q8NGZ2 314 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 FER1L6-AS2Q96M78 137 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM204Q9BSN7 226 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 TWSG1Q9GZX9 223 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 IKZF5Q9H5V7 419 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 AUNIPQ9H7T9 357 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CUEDC1Q9NWM3 386 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF816-ZNF321PA0A0X1KG74 233 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF860A6NHJ4 632 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 DXOO77932 396 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CD46P15529 392 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 SRD5A2P31213 254 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CRYBB2P43320 205 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 POU3F4P49335 361 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 MXD1Q05195 221 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 UBXN2BQ14CS0 331 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 NR0B2Q15466 257 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 NHLRC3Q5JS37 347 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 PLBD1Q6P4A8 553 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 NETO2Q8NC67 525 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM45BQ96B21 275 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 EMC9Q9Y3B6 208 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 SNX11Q9Y5W9 270 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 RFPL4AA6NLU0 287 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 RFPL4AL1F8VTS6 287 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 HCRTO43612 131 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OPN1SWP03999 348 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 S100A6P06703 90 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR1D4P47884 311 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 SGSHP51688 502 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CFHR1Q03591 330 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF92Q03936 586 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 AIMP2Q13155 320 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 PRAMEF17Q5VTA0 474 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 PLPP7Q8NBV4 271 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR6F1Q8NGZ6 308 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZCCHC4Q9H5U6 513 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 SEBOXQ9HB31 216 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 NDRG3Q9UGV2 375 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 A6NLC8 198 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 MPDU1O75352 247 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CSO75390 466 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 GLSO94925 669 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 RAB3DO95716 219 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CD8AP01732 235 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR8U9P0C7N5 309 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 AZGP1P25311 298 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 DRD3P35462 400 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 SLC17A1Q14916 467 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 DCAF12Q5T6F0 453 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 FIGNL1Q6PIW4 674 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 LRRC69Q6ZNQ3 347 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ATG4DQ86TL0 474 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR8H1Q8NGG4 311 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 OR8U1Q8NH10 309 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 GAL3ST1Q99999 423 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 SOX17Q9H6I2 414 aaPredicted RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 PATZ1Q9HBE1 687 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ASH2LQ9UBL3 628 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 FBXL4Q9UKA2 621 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 KIAA1549Q9HCM3 1950 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms