RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 RFPL4AA6NLU0 287 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 RFPL4AL1F8VTS6 287 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 PHYHO14832 338 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 ARPC3O15145 178 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 CNR1P21554 472 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 PPT1P50897 306 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 FZD5Q13467 585 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 RGS7BPQ6MZT1 257 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 MARCH1Q8TCQ1 289 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 THRSPQ92748 146 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 C12orf57Q99622 126 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 JAM3Q9BX67 310 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 EIF5A2Q9GZV4 153 aaKnown RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 RPS10P5Q9NQ39 176 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 GAAP10253 952 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 MGMTP16455 207 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF14P17017 642 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 SERPINF1P36955 418 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 CLDN6P56747 220 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 CSNK2A1P68400 391 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 C19orf47Q8N9M1 422 aaKnown RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 CSNK2A3Q8NEV1 391 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 OR4K17Q8NGC6 315 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 OR4K15Q8NH41 348 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 NT5CQ8TCD5 201 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 STK35Q8TDR2 534 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 ELP5Q8TE02 316 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 TOMM40LQ969M1 308 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 TAAR8Q969N4 342 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 C4orf45Q96LM5 186 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 JSRP1Q96MG2 331 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 BCL2L14Q9BZR8 327 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 GAREM1Q9H706 876 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 RHBDD3Q9Y3P4 386 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 KCNMB2Q9Y691 235 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 TMEM272A0A1B0GTI8 110 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 OR4C45A6NMZ5 311 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 CYR61O00622 381 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 EFEMP2O95967 443 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 RBMXP38159 391 aaKnown RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 SLC17A1Q14916 467 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 SGCAQ16586 387 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 ADGRE4PQ86SQ3 457 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 RGP1Q92546 391 aaPredicted RBP12.43□□□□□ -0.42
SGMS1-203ENST00000429490 MED29Q9NX70 200 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 HEATR5AQ86XA9 2040 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 NOTCH4Q99466 2003 aa12.43□□□□□ -0.42
SGMS1-203ENST00000429490 A0A0A6YYH2 397 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 IGHV3-20A0A0C4DH32 117 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 A6NJ64 397 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 SLC17A2O00624 439 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 MED6O75586 246 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 SNRNP70P08621 437 aaKnown RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 BDKRB2P30411 391 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 BLKP51451 505 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 PPP1R1AQ13522 171 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ELOCQ15369 112 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 TOMM34Q15785 309 aaPredicted RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 TMEM225Q6GV28 225 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF704Q6ZNC4 412 aaPredicted RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ANGPTL5Q86XS5 388 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ANKRD9Q96BM1 317 aaPredicted RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 C20orf24Q9BUV8 137 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ABHD6Q9BV23 337 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 SERTAD3Q9UJW9 196 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 FAM96BQ9Y3D0 163 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 PIAS3Q9Y6X2 628 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 OR5K3A6NET4 321 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 MFSD2BA6NFX1 497 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 PRR32B1ATL7 298 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 J3QRE1 110 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 TXNL1O43396 289 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ICOSLGO75144 302 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 WNT11O96014 354 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 CTRB1P17538 263 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 RAB6AP20340 208 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 SFTPDP35247 375 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 FMODQ06828 376 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 PDZK1IP1Q13113 114 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 NKAIN2Q5VXU1 208 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 CTRB2Q6GPI1 263 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ACOT7LQ6ZUV0 252 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ZNF679Q8IYX0 411 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 OR5H2Q8NGV7 314 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 TSPAN32Q96QS1 320 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 MYO15AQ9UKN7 3530 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ICAM2P13598 275 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 ALOX5APP20292 161 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 DEFB133Q30KQ1 61 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 EXOSC6Q5RKV6 272 aaKnown RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 TMEM200AQ86VY9 491 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 FAM160A2Q8N612 972 aaPredicted RBP12.42□□□□□ -0.42
SGMS1-203ENST00000429490 CRB3Q9BUF7 120 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 POLE3Q9NRF9 147 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 OR52A1Q9UKL2 312 aa12.42□□□□□ -0.42
SGMS1-203ENST00000429490 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
SGMS1-203ENST00000429490 MEF2DQ14814 521 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms