RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 LCN8Q6JVE9 175 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 PGM2L1Q6PCE3 622 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.7■□□□□ 0.42
HSPG2-205ENST00000427897 HIPK1Q86Z02 1210 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 LINC00471Q8N535 108 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 GPA33Q99795 319 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 NUAK2Q9H093 628 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 CHODLQ9H9P2 273 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 SRA1Q9HD15 236 aaKnown RBP17.7■□□□□ 0.42
HSPG2-205ENST00000427897 PLEK2Q9NYT0 353 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 KCNS2Q9ULS6 477 aa17.7■□□□□ 0.42
HSPG2-205ENST00000427897 HIVEP2P31629 2446 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 IMPA2O14732 288 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 LMX1BO60663 402 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 ABHD16AO95870 558 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 IFNA2P01563 188 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 HPXP02790 462 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 SCG5P05408 212 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 CDKN2AP42771 156 aaKnown RBP17.69■□□□□ 0.42
HSPG2-205ENST00000427897 GPR6P46095 362 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-205ENST00000427897 TEKQ02763 1124 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 AQP6Q13520 282 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 LEG1Q6P5S2 330 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 OR52L1Q8NGH7 329 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 SLC25A40Q8TBP6 338 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 SAMD8Q96LT4 415 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 SNX18Q96RF0 628 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 BEX2Q9BXY8 128 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 OR2J1Q9GZK6 312 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 VSX1Q9NZR4 365 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-205ENST00000427897 CDC42EP3Q9UKI2 254 aa17.69■□□□□ 0.42
HSPG2-205ENST00000427897 IGLV3-9A0A075B6K5 115 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 LRP5LA4QPB2 252 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 CCNB2O95067 398 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 MPZL1O95297 269 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 TXNDC12O95881 172 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 TGFAP01135 160 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 IGHV3-13P01766 116 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 COX5BP10606 129 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 ATP6V1B2P21281 511 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 ACHEP22303 614 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 COL8A2P25067 703 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 WNT5AP41221 380 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 MAGEB1P43366 347 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 ZNF81P51508 661 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 LSM6P62312 80 aaKnown RBP17.68■□□□□ 0.42
HSPG2-205ENST00000427897 CCL8P80075 99 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 TSPAN31Q12999 210 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 TSTQ16762 297 aaKnown RBP17.68■□□□□ 0.42
HSPG2-205ENST00000427897 ELFN2Q5R3F8 820 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 C1orf94Q6P1W5 598 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 PTCHD4Q6ZW05 846 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 ZNF101Q8IZC7 436 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 OR4K13Q8NH42 304 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 CDADC1Q9BWV3 514 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 SHARPINQ9H0F6 387 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 MAGIXQ9H6Y5 334 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 ASH2LQ9UBL3 628 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 GRIP1Q9Y3R0 1128 aa17.68■□□□□ 0.42
HSPG2-205ENST00000427897 PPIHO43447 177 aaKnown RBP17.67■□□□□ 0.42
HSPG2-205ENST00000427897 IDH3BO43837 385 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 CDC14BO60729 498 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 HLA-DQA2P01906 255 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 GSTM3P21266 225 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 LIPAP38571 399 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 GSSP48637 474 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 FXYD6P3P58550 94 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 RIN1Q13671 783 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 RPL13AP3Q6NVV1 102 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 ASRGL1Q7L266 308 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 KLF14Q8TD94 323 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-205ENST00000427897 MARS2Q96GW9 593 aaKnown RBP17.67■□□□□ 0.42
HSPG2-205ENST00000427897 NMNAT3Q96T66 252 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 REEP1Q9H902 201 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 CYSLTR2Q9NS75 346 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 LPAR3Q9UBY5 353 aa17.67■□□□□ 0.42
HSPG2-205ENST00000427897 CHD3Q12873 2000 aaKnown RBP17.67■□□□□ 0.42
HSPG2-205ENST00000427897 ACOT8O14734 319 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 ARPC3O15145 178 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 SPRY3O43610 288 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 TIMM8AO60220 97 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-205ENST00000427897 HIST1H1CP16403 213 aaKnown RBP17.66■□□□□ 0.42
HSPG2-205ENST00000427897 HNF1AP20823 631 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 TMEM33P57088 247 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 MS4A2Q01362 244 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 FLOT2Q14254 428 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 SLC36A3Q495N2 470 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 SLC35F1Q5T1Q4 408 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 OTPQ5XKR4 325 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 PGBD2Q6P3X8 592 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 PRIMA1Q86XR5 153 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 NPEPL1Q8NDH3 523 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 OR52E2Q8NGJ4 325 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 IPCEF1Q8WWN9 437 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-205ENST00000427897 MSI2Q96DH6 328 aaKnown RBP17.66■□□□□ 0.42
HSPG2-205ENST00000427897 COG8Q96MW5 612 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 TSSK2Q96PF2 358 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 NARFLQ9H6Q4 476 aa17.66■□□□□ 0.42
HSPG2-205ENST00000427897 RPRD1BQ9NQG5 326 aaKnown RBP17.66■□□□□ 0.42
HSPG2-205ENST00000427897 B9D1Q9UPM9 204 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms