RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MGMTP16455 207 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 AVPR2P30518 371 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 AGTR1P30556 359 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 RORAP35398 523 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 PPICP45877 212 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 RABIFP47224 123 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 CAPZA1P52907 286 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 HSD17B7P56937 341 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 SCAND1P57086 179 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 CLVS2Q5SYC1 327 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 FNDC7Q5VTL7 733 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 HLA-DQA1Q5Y7H0 255 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 UNQ6126/PRO20091Q6UXV3 157 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 GVQW1Q8N7I0 195 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 PPP1R1CQ8WVI7 109 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC41A2Q96JW4 573 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 TWSG1Q9GZX9 223 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 YBX2Q9Y2T7 364 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 MYO15AQ9UKN7 3530 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 TRAV36DV7A0A075B6V5 113 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 A0A1W2PPC1 479 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 FAM74A7A6NL05 159 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 TPPPO94811 219 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 AKR1C4P17516 323 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 IL32P24001 234 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DLSTP36957 453 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 GNALP38405 381 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 EIF1AXP47813 144 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 ATP1B3P54709 279 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC37A1P57057 533 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 RPL27P61353 136 aaKnown RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 IGLV3-21P80748 117 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 MC2RQ01718 297 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 CCINQ13939 588 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC22A6Q4U2R8 563 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 FAM74A3Q4VXF1 159 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 OR52W1Q6IF63 320 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 CORO6Q6QEF8 472 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DEFB119Q8N690 84 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM229BQ8NBD8 167 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 BPIFCQ8NFQ6 507 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 CCNL2Q96S94 520 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 ALX4Q9H161 411 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC25A32Q9H2D1 315 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 FBRSQ9HAH7 460 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 CYP8B1Q9UNU6 501 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 LRP12Q9Y561 859 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 SLCO1B1Q9Y6L6 691 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 DOCK8Q8NF50 2099 aa6.77□□□□□ -1.33
SMARCC1-202ENST00000425518 EML5Q05BV3 1969 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 A0A0D9SG52 128 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 BGLAPP02818 100 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 CLPSP04118 112 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 UBBP0CG47 229 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 UBCP0CG48 685 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 PRKACAP17612 351 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 GFERP55789 205 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 RPS27AP62979 156 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 UBA52P62987 128 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 RNASE10Q5GAN6 216 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 ASB17Q8WXJ9 295 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 ATXN7L1Q9ULK2 861 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 RP1P56715 2156 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 C2orf72A6NCS6 295 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM150CB9EJG8 249 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 P2RY10O00398 339 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 HLA-DOBP13765 273 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF823P16415 610 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 FGL1Q08830 312 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 SERTAD2Q14140 314 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 FZD2Q14332 565 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 C9orf50Q5SZB4 431 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 ESX1Q8N693 406 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 OR13C8Q8NGS7 320 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 NUDCD2Q8WVJ2 157 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 TCTN2Q96GX1 697 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 LAT2Q9GZY6 243 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 ADAM19Q9H013 955 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 PCDHB16Q9NRJ7 776 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 DZANK1Q9NVP4 752 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 RASL12Q9NYN1 266 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 DHCR7Q9UBM7 475 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 KLK13Q9UKR3 277 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 HHLA2Q9UM44 414 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 TMED7Q9Y3B3 224 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 HS3ST3A1Q9Y663 406 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 PIAS3Q9Y6X2 628 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM269A0A1B0GVZ9 245 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 LOC107986453A0A1B0GWG9 222 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 C5orf51A6NDU8 294 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 OR2AT4A6NND4 320 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 DISC1C4P0D8 188 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 PRAMEF26H0Y7S4 382 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 GABRG2P18507 467 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 IL13RA1P78552 427 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 FMODQ06828 376 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 PPP1R1AQ13522 171 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms