RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 FAM109AQ8N4B1 249 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ZFAND2BQ8WV99 257 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 RND1Q92730 232 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 RRNAD1Q96FB5 475 aaKnown RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 LIN37Q96GY3 246 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ATF6BQ99941 703 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 CHRNA10Q9GZZ6 450 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ERVK13-1Q9NX77 482 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 GLTPQ9NZD2 209 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 PIGLQ9Y2B2 252 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 MED12Q93074 2177 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 MAGEB4O15481 346 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 CBFA2T3O75081 653 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 LIFP15018 202 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 BDKRB2P30411 391 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ACTBP60709 375 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ACTG1P63261 375 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 PMP22Q01453 160 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ALKBH1Q13686 389 aaKnown RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ATXN7L3Q14CW9 347 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 RNPS1Q15287 305 aaKnown RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF718Q3SXZ3 478 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 EMC4Q5J8M3 183 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 SPATA46Q5T0L3 261 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 PAQR6Q6TCH4 344 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 C17orf82Q86X59 251 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ACBD4Q8NC06 268 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 TAAR8Q969N4 342 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 MUL1Q969V5 352 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 FOXRED1Q96CU9 486 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 SPSB2Q99619 263 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 PMF1-BGLAPU3KQ54 211 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ALPK3Q96L96 1907 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 GCM2O75603 506 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 KNG1P01042 644 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 PRH1P02810 166 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 SP1P08047 785 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 UBCP0CG48 685 aaKnown RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 MECP2P51608 486 aaKnown RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 OR8G1Q15617 311 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 RAB39BQ96DA2 213 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 OR14A2Q96R54 314 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 GABARAPL3Q9BY60 117 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 NOX4Q9NPH5 578 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 KCNJ16Q9NPI9 418 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 GPR27Q9NS67 375 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF226Q9NYT6 803 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 FOXJ2Q9P0K8 574 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 KIF26AQ9ULI4 1882 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 PRR19A6NJB7 356 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 SCGNO76038 276 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 HTR2AP28223 471 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 ARF1P84077 181 aaKnown RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 FUT5Q11128 374 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF169Q14929 603 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 Q499Y3 187 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 ZFP69Q49AA0 526 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 EXOSC6Q5RKV6 272 aaKnown RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 TMEM205Q6UW68 189 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 SHISA5Q8N114 240 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 SMAP2Q8WU79 429 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 TMEM59Q9BXS4 323 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 QPCTLQ9NXS2 382 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 TRAPPC2LQ9UL33 140 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 A0A1W2PQ09 198 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 MCRIP1C9JLW8 97 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 NDUFB7P17568 137 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 PTH2RP49190 550 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 HMGA2P52926 109 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 LRRC37A5PQ49AS3 106 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 SFRP4Q6FHJ7 346 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.75□□□□□ -1.01
CMSS1-201ENST00000421999 SEMA6DQ8NFY4 1073 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 OR5M11Q96RB7 305 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 CLEC2DQ9UHP7 191 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 KLK4Q9Y5K2 254 aa8.75□□□□□ -1.01
CMSS1-201ENST00000421999 ANKRD33BA6NCL7 494 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 CCL21O00585 134 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 GABRPO00591 440 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 EFSO43281 561 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 HEXAP06865 529 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 CAV3P56539 151 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
CMSS1-201ENST00000421999 DMRTC1Q5HYR2 192 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 C1QL3Q5VWW1 255 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 TMEM81Q6P7N7 255 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 OR52I1Q8NGK6 324 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 OR6Q1Q8NGQ2 317 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 OR51E1Q8TCB6 317 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 CTHRC1Q96CG8 243 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 DMRTB1Q96MA1 342 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 SORCS2Q96PQ0 1159 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 CMSS1Q9BQ75 279 aaKnown RBP8.74□□□□□ -1.01
CMSS1-201ENST00000421999 RHNO1Q9BSD3 238 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 SELENOIQ9C0D9 397 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 B3GAT1Q9P2W7 334 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 KCNG2Q9UJ96 466 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 WDR87Q6ZQQ6 2873 aa8.74□□□□□ -1.01
CMSS1-201ENST00000421999 MYO7BQ6PIF6 2116 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms