RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 FHL1Q13642 323 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 HLXQ14774 488 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-203ENST00000420503 DEFB112Q30KQ8 113 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 RABL3Q5HYI8 236 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 RUSC1-AS1Q66K80 236 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 TREML1Q86YW5 311 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 KLHL36Q8N4N3 616 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 SPICQ8N5J4 248 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 POU5F2Q8N7G0 328 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 LRRC75AQ8NAA5 344 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 C19orf18Q8NEA5 215 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 OR10AD1Q8NGE0 317 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 OR52E2Q8NGJ4 325 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 TMEM239Q8WW34 195 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 WFDC12Q8WWY7 111 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 SLC25A28Q96A46 364 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 DACT3Q96B18 629 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-203ENST00000420503 CMBLQ96DG6 245 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 OR2V2Q96R30 315 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 DIRC2Q96SL1 478 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 MRI1Q9BV20 369 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 KCNN2Q9H2S1 579 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 MARCH7Q9H992 704 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 RIMS3Q9UJD0 308 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 ZDHHC8Q9ULC8 765 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 CORO2BQ9UQ03 480 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 STARD10Q9Y365 291 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 TRAV27A0A087WT01 109 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 TMEM178BH3BS89 294 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 CLDN34H7C241 214 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 ICMTO60725 284 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 EDF1O60869 148 aaKnown RBP10.77□□□□□ -0.69
LINC00339-203ENST00000420503 ABHD16AO95870 558 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 PLATP00750 562 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 CST2P09228 141 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 WNT2P09544 360 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 TAS2R41P59536 307 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 NFYCQ13952 458 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 C1orf94Q6P1W5 598 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 FOXL2NBQ6ZUU3 175 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 RHOUQ7L0Q8 258 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 TXNIPQ9H3M7 391 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 CCDC134Q9H6E4 229 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 SMURF2Q9HAU4 748 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 CYSLTR2Q9NS75 346 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 GMPR2Q9P2T1 348 aaKnown RBP10.77□□□□□ -0.69
LINC00339-203ENST00000420503 OR5V1Q9UGF6 321 aa10.77□□□□□ -0.69
LINC00339-203ENST00000420503 IGHV2-70DA0A0C4DH43 119 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 CENPBD1B2RD01 187 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 FBP2O00757 339 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 TGDSO95455 350 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 DBHP09172 617 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 ZNF26P17031 533 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-203ENST00000420503 PMELP40967 661 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 YAP1P46937 504 aaKnown RBP10.76□□□□□ -0.69
LINC00339-203ENST00000420503 CTXN1P60606 82 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 VMACQ2NL98 169 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 ESCO2Q56NI9 601 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 ALG10Q5BKT4 473 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 LYPD2Q6UXB3 125 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 PATL1Q86TB9 770 aaKnown RBP10.76□□□□□ -0.69
LINC00339-203ENST00000420503 C1QL4Q86Z23 238 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 DPP10Q8N608 796 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 OR13C2Q8NGS9 318 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 OR51A7Q8NH64 312 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 SLC26A7Q8TE54 656 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 UPRTQ96BW1 309 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 SAMD8Q96LT4 415 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 GPA33Q99795 319 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 CDADC1Q9BWV3 514 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 EVA1AQ9H8M9 152 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 TMEM165Q9HC07 324 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 GCM1Q9NP62 436 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 POLE4Q9NR33 117 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 RHCGQ9UBD6 479 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 PPP1R3CQ9UQK1 317 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 HIF3AQ9Y2N7 669 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 NDUFAF1Q9Y375 327 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 TIMM10BQ9Y5J6 103 aa10.76□□□□□ -0.69
LINC00339-203ENST00000420503 POM121CA8CG34 1229 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 C22orf46C9J442 243 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 FXYD1O00168 92 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 DOK2O60496 412 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 IFI30P13284 250 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 RPS2P15880 293 aaKnown RBP10.75□□□□□ -0.69
LINC00339-203ENST00000420503 KITLGP21583 273 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 MSR1P21757 451 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 MDH2P40926 338 aaKnown RBP10.75□□□□□ -0.69
LINC00339-203ENST00000420503 HTR5AP47898 357 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 RPL27P61353 136 aaKnown RBP10.75□□□□□ -0.69
LINC00339-203ENST00000420503 GUCY1A3Q02108 690 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 C16orf87Q6PH81 154 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 C9orf139Q6ZV77 190 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 VASH1Q7L8A9 365 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-203ENST00000420503 KLBQ86Z14 1044 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 OR10S1Q8NGN2 331 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 LIPHQ8WWY8 451 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms