RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 CCL21O00585 134 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 PLPP3O14495 311 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 CDC42EP2O14613 210 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 GPR171O14626 319 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 DHFRP00374 187 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 PLGP00747 810 aaPredicted RBP12.89□□□□□ -0.35
SGCE-202ENST00000415788 GLI4P10075 376 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 UQCRFS1P47985 274 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 RPS4XP62701 263 aaKnown RBP12.89□□□□□ -0.35
SGCE-202ENST00000415788 TAGLNQ01995 201 aaKnown RBP12.89□□□□□ -0.35
SGCE-202ENST00000415788 RASGEF1BQ0VAM2 473 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 ZP4Q12836 540 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 P2RY14Q15391 338 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 C4orf17Q53FE4 359 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 EEF1A1P5Q5VTE0 462 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 ZNF57Q68EA5 555 aaPredicted RBP12.89□□□□□ -0.35
SGCE-202ENST00000415788 SEM1Q6ZVN7 128 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 LRRC20Q8TCA0 184 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 ABHD3Q8WU67 409 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 RNFT2Q96EX2 444 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 OXGR1Q96P68 337 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 BCO1Q9HAY6 547 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 EMC3Q9P0I2 261 aa12.89□□□□□ -0.35
SGCE-202ENST00000415788 IGKV3D-15A0A087WSY6 115 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 UNC119BA6NIH7 251 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 ZNF724A8MTY0 619 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 ZNF814B7Z6K7 855 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 SLC6A1P30531 599 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 SNAPC1Q16533 368 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 HSD17B12Q53GQ0 312 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 RPL13AP3Q6NVV1 102 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 BCDIN3DQ7Z5W3 292 aaKnown RBP12.88□□□□□ -0.35
SGCE-202ENST00000415788 PXKQ7Z7A4 578 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 GLCCI1Q86VQ1 547 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 RPRMLQ8N4K4 120 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 SYT14Q8NB59 555 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 GATAD2BQ8WXI9 593 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 RND1Q92730 232 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 MED28Q9H204 178 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 NARFLQ9H6Q4 476 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 KLHL13Q9P2N7 655 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 U3KQ87 197 aa12.88□□□□□ -0.35
SGCE-202ENST00000415788 SPENQ96T58 3664 aaKnown RBP12.88□□□□□ -0.35
SGCE-202ENST00000415788 NBEAQ8NFP9 2946 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 ZNF716A6NP11 495 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 HSPB2A8KAH6 182 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 KDM4EB2RXH2 506 aaPredicted RBP12.87□□□□□ -0.35
SGCE-202ENST00000415788 BLOC1S5-TXNDC5H3BN57 136 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 AKAP8O43823 692 aaKnown RBP12.87□□□□□ -0.35
SGCE-202ENST00000415788 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
SGCE-202ENST00000415788 KLK2P20151 261 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 CEACAM8P31997 349 aaPredicted RBP12.87□□□□□ -0.35
SGCE-202ENST00000415788 RPL18Q07020 188 aaKnown RBP12.87□□□□□ -0.35
SGCE-202ENST00000415788 PMPCAQ10713 525 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 HSPB2Q16082 182 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 OR2G6Q5TZ20 316 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 PLXDC2Q6UX71 529 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 GPAT4Q86UL3 456 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 IQCF1Q8N6M8 205 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 ARIH2OSQ8N7S6 290 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 ZNF431Q8TF32 576 aaPredicted RBP12.87□□□□□ -0.35
SGCE-202ENST00000415788 GPA33Q99795 319 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 TAS2R5Q9NYW4 299 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 POLEQ07864 2286 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 GTF3C1Q12789 2109 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 C7orf66A4D0T2 115 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 MS4A18H0YCH9 400 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 FABP7O15540 132 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 RNF13O43567 381 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 RAMP1O60894 148 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 TOXO94900 526 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 ZNF43P17038 809 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 AHCYP23526 432 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 STOMP27105 288 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 MTNR1AP48039 350 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 MS4A18Q3C1V0 323 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 PLA1AQ53H76 456 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 FAM214BQ7L5A3 538 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
SGCE-202ENST00000415788 UEVLDQ8IX04 471 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 ZNF485Q8NCK3 441 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 OR9K2Q8NGE7 335 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 OR51A7Q8NH64 312 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 RERGLQ9H628 205 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 B3GAT1Q9P2W7 334 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
SGCE-202ENST00000415788 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
SGCE-202ENST00000415788 TRAV27A0A087WT01 109 aa12.86□□□□□ -0.35
SGCE-202ENST00000415788 LRRTM2O43300 516 aa12.86□□□□□ -0.35
SGCE-202ENST00000415788 PTP4A3O75365 173 aa12.86□□□□□ -0.35
SGCE-202ENST00000415788 NDUFB2O95178 105 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms