RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TNFRSF1AP19438 455 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 TUBG1P23258 451 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 MDH2P40926 338 aaKnown RBP10.19□□□□□ -0.78
LIMS2-210ENST00000413578 MTNR1AP48039 350 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 MMP16P51512 607 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 TAF11Q15544 211 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 ESCO2Q56NI9 601 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 SYT9Q86SS6 491 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 JAZF1Q86VZ6 243 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 NPEPL1Q8NDH3 523 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 TMEM239Q8WW34 195 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 ITLN1Q8WWA0 313 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 WFDC12Q8WWY7 111 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 TMIGD2Q96BF3 282 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 MS4A7Q9GZW8 240 aaPredicted RBP10.19□□□□□ -0.78
LIMS2-210ENST00000413578 TUBG2Q9NRH3 451 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 MAN2C1Q9NTJ4 1040 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 OR5V1Q9UGF6 321 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 NDRG4Q9ULP0 352 aaKnown RBP10.19□□□□□ -0.78
LIMS2-210ENST00000413578 IGHV3OR16-10A0A075B7F0 116 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 IGHV2-70DA0A0C4DH43 119 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 FSTL3O95633 263 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 TNFRSF1BP20333 461 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 MSR1P21757 451 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 TNFSF4P23510 183 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 ERFP50548 548 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 ARHGDIAP52565 204 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 RPL27P61353 136 aaKnown RBP10.18□□□□□ -0.78
LIMS2-210ENST00000413578 PCBD1P61457 104 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 PIN1Q13526 163 aaPredicted RBP10.18□□□□□ -0.78
LIMS2-210ENST00000413578 FHL1Q13642 323 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 VMACQ2NL98 169 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 ALG10Q5BKT4 473 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 INTS11Q5TA45 600 aaKnown RBP10.18□□□□□ -0.78
LIMS2-210ENST00000413578 LRRN1Q6UXK5 716 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 MUC20Q8N307 709 aaPredicted RBP10.18□□□□□ -0.78
LIMS2-210ENST00000413578 POU5F2Q8N7G0 328 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 OR2Z1Q8NG97 314 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 OR10A6Q8NH74 314 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 FNDC8Q8TC99 324 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 C10orf82Q8WW14 230 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 RASSF5Q8WWW0 418 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 STON2Q8WXE9 905 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 HAVCR1Q96D42 359 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 OR2V2Q96R30 315 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 WACQ9BTA9 647 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 TMEM165Q9HC07 324 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 TMBIM4Q9HC24 238 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 GCM1Q9NP62 436 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 POLE4Q9NR33 117 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 PDP1Q9P0J1 537 aaPredicted RBP10.18□□□□□ -0.78
LIMS2-210ENST00000413578 RIMS3Q9UJD0 308 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 PPP1R3CQ9UQK1 317 aa10.18□□□□□ -0.78
LIMS2-210ENST00000413578 TRAV40A0A0B4J280 105 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 A0A1B0GUS0 222 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 MDFIC2A0A1B0GVS7 189 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 PIP5K1CO60331 668 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 ABHD16AO95870 558 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 GPANK1O95872 356 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 VIMP08670 466 aaKnown RBP10.17□□□□□ -0.78
LIMS2-210ENST00000413578 THRBP10828 461 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 GSTM3P21266 225 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 OMGP23515 440 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 RELBQ01201 579 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 SRSF4Q08170 494 aaKnown RBP10.17□□□□□ -0.78
LIMS2-210ENST00000413578 TOP3AQ13472 1001 aaPredicted RBP10.17□□□□□ -0.78
LIMS2-210ENST00000413578 ARL9Q6T311 187 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 SPATC1Q76KD6 591 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 RHOUQ7L0Q8 258 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 RAB40AQ8WXH6 277 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 CMBLQ96DG6 245 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 THOC1Q96FV9 657 aaKnown RBP10.17□□□□□ -0.78
LIMS2-210ENST00000413578 RBP7Q96R05 134 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 CITED1Q99966 193 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 SSBP3Q9BWW4 388 aaPredicted RBP10.17□□□□□ -0.78
LIMS2-210ENST00000413578 RABEP2Q9H5N1 569 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 ARMCX1Q9P291 453 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 STARD10Q9Y365 291 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 SH3GLB1Q9Y371 365 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 NDUFAF1Q9Y375 327 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 MED31Q9Y3C7 131 aa10.17□□□□□ -0.78
LIMS2-210ENST00000413578 KIR2DS1A0A191URI9 304 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 C12orf71A8MTZ7 269 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 IFNL4K9M1U5 179 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 SURF4O15260 269 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 HOXA3O43365 443 aaPredicted RBP10.16□□□□□ -0.78
LIMS2-210ENST00000413578 FUT4P22083 530 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 TAS2R41P59536 307 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 DEFB112Q30KQ8 113 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 ZNF362Q5T0B9 420 aaPredicted RBP10.16□□□□□ -0.78
LIMS2-210ENST00000413578 FAM205BPQ63HN1 556 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 BTNL3Q6UXE8 466 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 VASH1Q7L8A9 365 aaPredicted RBP10.16□□□□□ -0.78
LIMS2-210ENST00000413578 CALHM3Q86XJ0 350 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 KLBQ86Z14 1044 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 LRRC8CQ8TDW0 803 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 SLC26A7Q8TE54 656 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 TSPEARQ8WU66 669 aa10.16□□□□□ -0.78
LIMS2-210ENST00000413578 A0A1B0GWJ7 208 aa10.15□□□□□ -0.78
LIMS2-210ENST00000413578 A0A1W2PPL8 197 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms