RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 LIPHQ8WWY8 451 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 TOMM40LQ969M1 308 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 ZNF799Q96GE5 643 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 FOXB1Q99853 325 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 GPR84Q9NQS5 396 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 PIGLQ9Y2B2 252 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 ZNF281Q9Y2X9 895 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 RBMX2Q9Y388 322 aaKnown RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 UBE2QL1A1L167 161 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 FAM221AA4D161 298 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 ZNF205O95201 554 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 IGKV3-11P04433 115 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 NGFRP08138 427 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 CRYBA2P53672 197 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 ATXN7L3Q14CW9 347 aaPredicted RBP10.19□□□□□ -0.78
SNX13-202ENST00000409604 GLYATL3Q5SZD4 288 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 TMEM244Q5VVB8 128 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 TMPRSS11FQ6ZWK6 438 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 UBALD1Q8TB05 177 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 ZCCHC14Q8WYQ9 949 aaKnown RBP10.19□□□□□ -0.78
SNX13-202ENST00000409604 FBXO17Q96EF6 278 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 MAN2C1Q9NTJ4 1040 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 GDF2Q9UK05 429 aaPredicted RBP10.19□□□□□ -0.78
SNX13-202ENST00000409604 OSGIN2Q9Y236 505 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 LOC102725191A0A1B0GVB3 256 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 ZNF850A8MQ14 1090 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 TSPAN2O60636 221 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 ARSBP15848 533 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 OR10A3P58181 314 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 PCBD1P61457 104 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 SF3B4Q15427 424 aaKnown RBP eCLIP10.19□□□□□ -0.782e-8■■■■□ 20.6
SNX13-202ENST00000409604 OLFML2AQ68BL7 652 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 SLC25A24Q6NUK1 477 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 TMEM81Q6P7N7 255 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 CNIH2Q6PI25 160 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 KCTD9Q7L273 389 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 CA5BP1Q8WTZ4 195 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 CPNE4Q96A23 557 aaPredicted RBP10.19□□□□□ -0.78
SNX13-202ENST00000409604 TXNL4BQ9NX01 149 aaKnown RBP10.19□□□□□ -0.78
SNX13-202ENST00000409604 GTF3C1Q12789 2109 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 E9PI62 339 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 PHYHO14832 338 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 APOC1P02654 83 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 GLI4P10075 376 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 PMPCAQ10713 525 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 LRRC37A5PQ49AS3 106 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 MCHR2Q969V1 340 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 PLPPR2Q96GM1 343 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 FUZQ9BT04 418 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 ABCG5Q9H222 651 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 ATP23Q9Y6H3 246 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 CEPT1Q9Y6K0 416 aa10.19□□□□□ -0.78
SNX13-202ENST00000409604 PLPP3O14495 311 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 CRYABP02511 175 aaKnown RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 ZNF883P0CG24 379 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 EIF2S3LQ2VIR3 472 aaKnown RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 SLC16A9Q7RTY1 509 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 FNDC8Q8TC99 324 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ELP5Q8TE02 316 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 GCDHQ92947 438 aaPredicted RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 KISS1RQ969F8 398 aaPredicted RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 KCNS2Q9ULS6 477 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 DIMT1Q9UNQ2 313 aaKnown RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 MOKQ9UQ07 419 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 FREM3P0C091 2139 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 C13orf42A0A1B0GVH6 325 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 LOC107986453A0A1B0GWG9 222 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 DCTN6O00399 190 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 CDC14BO60729 498 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ECDO95905 644 aaPredicted RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 FAHP16930 419 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ZNF32P17041 273 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 KLK2P20151 261 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 VEGFCP49767 419 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ALKBH1Q13686 389 aaKnown RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 HIKESHIQ53FT3 197 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 FHL5Q5TD97 284 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 VASH1Q7L8A9 365 aaPredicted RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 PHC2Q8IXK0 858 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 PTP4A1Q93096 173 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ZNF416Q9BWM5 594 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 PTTG3PQ9NZH4 202 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 V9GY05 133 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 OR6C65A6NJZ3 312 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 NTN3O00634 580 aaPredicted RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 ANGPTL7O43827 346 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 IRF2P14316 349 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 FAUP35544 74 aaKnown RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 MLLT11Q13015 90 aaPredicted RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 LIN54Q6MZP7 749 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 LAX1Q8IWV1 398 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 OR6Q1Q8NGQ2 317 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 RNF170Q96K19 258 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ATF6BQ99941 703 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 PLEKHJ1Q9NW61 149 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 DLGAP1O14490 977 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 DPM1O60762 260 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 ART1P52961 327 aa10.18□□□□□ -0.78
SNX13-202ENST00000409604 GP2P55259 537 aaKnown RBP10.18□□□□□ -0.78
SNX13-202ENST00000409604 TCF15Q12870 199 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms