RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GRB7Q14451 532 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 PAFAH1B3Q15102 231 aaKnown RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF77Q15935 545 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 DGUOKQ16854 277 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 PRR30Q53SZ7 412 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 HHATQ5VTY9 493 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 SYPL2Q5VXT5 272 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 MFSD14CQ5VZR4 134 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 NCBP2-AS2Q69YL0 99 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 C11orf71Q6IPW1 123 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 CXCL17Q6UXB2 119 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 CLEC20AQ6ZU45 233 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 LRRC6Q86X45 466 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR52H1Q8NGJ2 320 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 TCP10LQ8TDR4 215 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 NEIL2Q969S2 332 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 NOL4LQ96MY1 436 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 TBX15Q96SF7 602 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 EBNA1BP2Q99848 306 aaKnown RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 KLHDC3Q9BQ90 382 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 MED10Q9BTT4 135 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 NARFLQ9H6Q4 476 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 FOLH1BQ9HBA9 442 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 CSNK1G1Q9HCP0 422 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 THUMPD1Q9NXG2 353 aaKnown RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 SLC17A7Q9P2U7 560 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 ABCD2Q9UBJ2 740 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 BTNL2Q9UIR0 455 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 NUP50Q9UKX7 468 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 MYH10P35580 1976 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 LRRC37A2A6NM11 1700 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 MYH11P35749 1972 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 A0A1B0GU03 582 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 TRIM49D1C9J1S8 452 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 E7ENQ6 273 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 GOLGA8RI6L899 631 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 DCTN6O00399 190 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 CASQ2O14958 399 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 MFSD11O43934 449 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 SOX15O60248 233 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 MGRN1O60291 552 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF189O75820 626 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 ATP5HO75947 161 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 LGI1O95970 557 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 CST1P01037 141 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR8U8P0C7N1 319 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 CCDC166P0CW27 439 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 SHMT2P34897 504 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 DDOSTP39656 456 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 MEOX2P50222 304 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 SERPINB9P50453 376 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 HLCSP50747 726 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 GPM6AP51674 278 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 NCALDP61601 193 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 ELF3P78545 371 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 MGAT3Q09327 533 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 CARD16Q5EG05 197 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 EOGTQ5NDL2 527 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 STEAP4Q687X5 459 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 UQCC3Q6UW78 93 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 CD300LGQ6UXG3 332 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 PAMR1Q6UXH9 720 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 TIFABQ6ZNK6 161 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 PID1Q7Z2X4 250 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 VRK2Q86Y07 508 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 CTAGE3PQ8IX95 158 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 FNDC5Q8NAU1 212 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR1L6Q8NGR2 347 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZPLD1Q8TCW7 415 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 GPR151Q8TDV0 419 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 C10orf82Q8WW14 230 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 DNAJA4Q8WW22 397 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 SLC38A4Q969I6 547 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 NTAN1Q96AB6 310 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 PGLYRP4Q96LB8 373 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 KLF6Q99612 283 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 ACBD6Q9BR61 282 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 NAT9Q9BTE0 207 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 ULBP1Q9BZM6 244 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 MFFQ9GZY8 342 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 SUDS3Q9H7L9 328 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 SLCO1B3Q9NPD5 702 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 PISDQ9UG56 409 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 SLC7A8Q9UHI5 535 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 KCNIP3Q9Y2W7 256 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 STARD10Q9Y365 291 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 USH1CQ9Y6N9 552 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 OTOFQ9HC10 1997 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 GON4LQ3T8J9 2241 aa3.58□□□□□ -1.84
HMGB3P18-201ENST00000406327 IGHV1OR21-1A0A087WYE8 117 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 ERI2A8K979 691 aaKnown RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 SRRM5B3KS81 715 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 KCNK1O00180 336 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 COPEO14579 308 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 HSD17B6O14756 317 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 BIRC5O15392 142 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 BCL2L11O43521 198 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 HCRTR1O43613 425 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 DCTN3O75935 186 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms