RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 GP1BBP13224 206 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 ZNF44P15621 663 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 BDKRB2P30411 391 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 P2RX1P51575 399 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 HLXQ14774 488 aaPredicted RBP10.85□□□□□ -0.67
HMGB1-206ENST00000405805 MRM1Q6IN84 353 aaKnown RBP10.85□□□□□ -0.67
HMGB1-206ENST00000405805 BAIAP2L2Q6UXY1 529 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 MED25Q71SY5 747 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.85□□□□□ -0.67
HMGB1-206ENST00000405805 TMEM52Q8NDY8 209 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 BCO1Q9HAY6 547 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 GOLT1BQ9Y3E0 138 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 NLRC5Q86WI3 1866 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 GPR89AB7ZAQ6 455 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 HCKP08631 526 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 GPR89BP0CG08 455 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 AKAIN1P0CW23 69 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 PI3P19957 117 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 UBE2KP61086 200 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 CAMK2DQ13557 499 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 STAC2Q6ZMT1 411 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 LURAP1LQ8IV03 231 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 ARIH2OSQ8N7S6 290 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 APOBEC4Q8WW27 367 aaKnown RBP10.85□□□□□ -0.67
HMGB1-206ENST00000405805 KLHL15Q96M94 604 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 OPA3Q9H6K4 179 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 SPACA1Q9HBV2 294 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 TMEM74BQ9NUR3 256 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 ZNF337Q9Y3M9 751 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 A0A087WV48 116 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 DCTN6O00399 190 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 AKR7A3O95154 331 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 SLC2A1P11166 492 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 ZNF20P17024 532 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 IL13RA1P78552 427 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 RIPPLY1Q0D2K3 151 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 SHHQ15465 462 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 STEAP1BQ6NZ63 245 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 MCATQ8IVS2 390 aaKnown RBP10.85□□□□□ -0.67
HMGB1-206ENST00000405805 TMEM151BQ8IW70 566 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 VWCEQ96DN2 955 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 WDR76Q9H967 626 aa10.85□□□□□ -0.67
HMGB1-206ENST00000405805 DHCR7Q9UBM7 475 aaKnown RBP10.85□□□□□ -0.67
HMGB1-206ENST00000405805 RBM7Q9Y580 266 aaKnown RBP10.85□□□□□ -0.67
HMGB1-206ENST00000405805 TMEM82A0PJX8 343 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ZNF878C9JN71 531 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 SPINT1O43278 529 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ADAM11O75078 769 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ZIC2O95409 532 aaPredicted RBP10.84□□□□□ -0.67
HMGB1-206ENST00000405805 KNG1P01042 644 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 MMP7P09237 267 aaPredicted RBP10.84□□□□□ -0.67
HMGB1-206ENST00000405805 EPHA4P54764 986 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 CLEC12BQ2HXU8 276 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 NUP54Q7Z3B4 507 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 PNLDC1Q8NA58 520 aaKnown RBP10.84□□□□□ -0.67
HMGB1-206ENST00000405805 SUMF2Q8NBJ7 301 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 OR5D18Q8NGL1 313 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 JSRP1Q96MG2 331 aaPredicted RBP10.84□□□□□ -0.67
HMGB1-206ENST00000405805 LANCL2Q9NS86 450 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 FLRT3Q9NZU0 649 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 NTMQ9P121 344 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 KCNG2Q9UJ96 466 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 RNF24Q9Y225 148 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 EXOGQ9Y2C4 368 aaKnown RBP10.84□□□□□ -0.67
HMGB1-206ENST00000405805 PIAS3Q9Y6X2 628 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 C5orf42Q9H799 3197 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ARG1P05089 322 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ST6GAL1P15907 406 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 TMEM11P17152 192 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 DIO1P49895 249 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 MMP15P51511 669 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ZNF136P52737 540 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 RIDAP52758 137 aaKnown RBP10.84□□□□□ -0.67
HMGB1-206ENST00000405805 TFF2Q03403 129 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 KIR2DS3Q14952 304 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 NSDHLQ15738 373 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 GUCA2BQ16661 112 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 TMEM184AQ6ZMB5 413 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 COX15Q7KZN9 410 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 OR4S1Q8NGB4 309 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 OR13C9Q8NGT0 318 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 MYADMQ96S97 322 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 KIR3DX1Q9H7L2 352 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 NPIPA5E9PKD4 350 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 SLC33A1O00400 549 aaPredicted RBP10.84□□□□□ -0.67
HMGB1-206ENST00000405805 GPRIN2O60269 458 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 OR2C1O95371 312 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 MPC2O95563 127 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 AK1P00568 194 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 IGHA1P01876 353 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ITGA5P08648 1049 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 H2BFMP0C1H6 154 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 GLI4P10075 376 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 CNR1P21554 472 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 PRPS1P60891 318 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 RAB4BP61018 213 aa10.84□□□□□ -0.67
HMGB1-206ENST00000405805 ZP2Q05996 745 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms