RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 IL19Q9UHD0 177 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF229Q9UJW7 825 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 DNAH7Q8WXX0 4024 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 BLOC1S5-TXNDC5H3BN57 136 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OPN1SWP03999 348 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TSPAN19P0C672 248 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 VSIG8P0DPA2 414 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 IDO1P14902 403 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FUT1P19526 365 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CFHR2P36980 270 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PCBP3P57721 371 aaKnown RBP9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NCALDP61601 193 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SCARB2Q14108 478 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF404Q494X3 552 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PAGE3Q5JUK9 113 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 LRIF1Q5T3J3 769 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FOXL2NBQ6ZUU3 175 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C1orf174Q8IYL3 243 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OR10AD1Q8NGE0 317 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PFN4Q8NHR9 129 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SLC7A6Q92536 515 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NEIL1Q96FI4 390 aaPredicted RBP9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 THOC1Q96FV9 657 aaKnown RBP9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MEGF10Q96KG7 1140 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 RAD21L1Q9H4I0 556 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 RMND5AQ9H871 391 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NANOGQ9H9S0 305 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C20orf141Q9NUB4 165 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SLC7A7Q9UM01 511 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 POMT1Q9Y6A1 747 aa9.86□□□□□ -0.83
SPTLC1P3-201ENST00000403408 A0A0U1RQK1 487 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CENPBD1B2RD01 187 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C3orf80F5H4A9 247 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 HDAC3O15379 428 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MLNRO43193 412 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FMO6PO60774 539 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SNNO75324 88 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 KITP10721 976 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TNFRSF1AP19438 455 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 IER3P46695 156 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PITPNBP48739 271 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CRYBA2P53672 197 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 LAPTM4AQ15012 233 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PDCD1Q15116 288 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TAF11Q15544 211 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FAM189A2Q15884 450 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 GPR157Q5UAW9 335 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OTPQ5XKR4 325 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NXNQ6DKJ4 435 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NANOGNBQ7Z5D8 188 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PTOV1Q86YD1 416 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ARMC8Q8IUR7 673 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OR5AS1Q8N127 324 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MUC20Q8N307 709 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ADAMTS16Q8TE57 1224 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 DYRK2Q92630 601 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 HAVCR1Q96D42 359 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FAM71F1Q96KD3 344 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PCGF1Q9BSM1 259 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SLC19A3Q9BZV2 496 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ROPN1BQ9BZX4 212 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C16orf95Q9H693 158 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TMEM38AQ9H6F2 299 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ROPN1Q9HAT0 212 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MAN2C1Q9NTJ4 1040 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CTSZQ9UBR2 303 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MIOXQ9UGB7 285 aa9.85□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C5orf63A6NC05 138 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ERLIN1O75477 346 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CST2P09228 141 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 UMPSP11172 480 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CD247P20963 164 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FUT4P22083 530 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 WDR4P57081 412 aaKnown RBP9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZMAT1Q5H9K5 638 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TTC33Q6PID6 262 aaPredicted RBP9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MOGAT3Q86VF5 341 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 KRT73Q86Y46 540 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NKAIN4Q8IVV8 208 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF454Q8N9F8 522 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 VANGL1Q8TAA9 524 aaPredicted RBP9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SSMEM1Q8WWF3 244 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SPATA5L1Q9BVQ7 753 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SEMA6AQ9H2E6 1030 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 INIPQ9NRY2 104 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TBCCD1Q9NVR7 557 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 GMEB1Q9Y692 573 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 STAB2Q8WWQ8 2551 aa9.84□□□□□ -0.83
SPTLC1P3-201ENST00000403408 A0A1W2PRG6 482 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PRORSD1PA6NEY8 169 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MCIDASD6RGH6 385 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OR7A10O76100 309 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ABHD16AO95870 558 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OPN1MWP04001 364 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CSF1P09603 554 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OPN1MW2P0DN77 364 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OPN1MW3P0DN78 364 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 GPX2P18283 190 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TNFSF4P23510 183 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms