RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NANOS3P60323 173 aaKnown RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 ZP4Q12836 540 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 IGFL3Q6UXB1 125 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 SLC16A12Q6ZSM3 486 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 GID4Q8IVV7 300 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 TMEM123Q8N131 208 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 OR2T4Q8NH00 348 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 IPCEF1Q8WWN9 437 aaPredicted RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 GIMAP1Q8WWP7 306 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 PPIL3Q9H2H8 161 aaKnown RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 GLTPQ9NZD2 209 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 SLC22A20A6NK97 555 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 B8ZZF3 427 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 IGHG1P01857 330 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 KRT8P05787 483 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 PTGS2P35354 604 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 DAP3P51398 398 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 MRPS15P82914 257 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 EIF2B1Q14232 305 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 HYAL4Q2M3T9 481 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 CEACAM16Q2WEN9 425 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 LILRB1Q8NHL6 650 aaPredicted RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 SNX33Q8WV41 574 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 CNTNAP3BQ96NU0 1288 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 ULBP2Q9BZM5 246 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 WDR12Q9GZL7 423 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 DKK4Q9UBT3 224 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 BAIAP2Q9UQB8 552 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 SLC22A13Q9Y226 551 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 ZNF462Q96JM2 2506 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 CCNKO75909 580 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 PNPP00491 289 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 IGF2P01344 180 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 PRKXP51817 358 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 TEKQ02763 1124 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 MFSD13AQ14CX5 517 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 GFOD2Q3B7J2 385 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 SLC25A30Q5SVS4 291 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 GPR139Q6DWJ6 353 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 KLHL24Q6TFL4 600 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 ZNF322Q6U7Q0 402 aaPredicted RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 PCSK4Q6UW60 755 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 P4HA3Q7Z4N8 544 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 OR51A4Q8NGJ6 313 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 RNF128Q8TEB7 428 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 CPNE4Q96A23 557 aaPredicted RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 PELI1Q96FA3 418 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 INTS14Q96SY0 518 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 TMEM246Q9BRR3 403 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 NAA11Q9BSU3 229 aaPredicted RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 ZNF416Q9BWM5 594 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 OR51B6Q9H340 312 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 PLSCR3Q9NRY6 295 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 DDX28Q9NUL7 540 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 CNOT2Q9NZN8 540 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 VSX1Q9NZR4 365 aaPredicted RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 MRM2Q9UI43 246 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 ENPP5Q9UJA9 477 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 LAMP5Q9UJQ1 280 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 EXOGQ9Y2C4 368 aaKnown RBP10.31□□□□□ -0.76
SKA3-203ENST00000400018 POLR1DQ9Y2S0 133 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 MYO18BQ8IUG5 2567 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 TACC2O95359 2948 aa10.31□□□□□ -0.76
SKA3-203ENST00000400018 GJE1A6NN92 205 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 KRT33AO76009 404 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 SYNGR4O95473 234 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 MFGE8Q08431 387 aaPredicted RBP10.3□□□□□ -0.76
SKA3-203ENST00000400018 KLHL22Q53GT1 634 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 FAM205BPQ63HN1 556 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 RTL6Q6ICC9 239 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 C5orf46Q6UWT4 87 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 SLC26A10Q8NG04 563 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 OR10S1Q8NGN2 331 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 RBP7Q96R05 134 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 CDCA4Q9BXL8 241 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 YTHDF1Q9BYJ9 559 aaKnown RBP10.3□□□□□ -0.76
SKA3-203ENST00000400018 NARFLQ9H6Q4 476 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 SLC5A6Q9Y289 635 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 VPS13CQ709C8 3753 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 ARHGAP21Q5T5U3 1957 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 LINC00854A0A1B0GVQ3 168 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 E9PLN8 166 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 LMX1BO60663 402 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 EIF1BO60739 113 aaKnown RBP10.3□□□□□ -0.76
SKA3-203ENST00000400018 CYTIPO60759 359 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 MRPL33O75394 65 aaKnown RBP10.3□□□□□ -0.76
SKA3-203ENST00000400018 GPX5O75715 221 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 LYZL6O75951 148 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 CLEC2LP0C7M8 214 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 BMP4P12644 408 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 M6PRP20645 277 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 RGS6P49758 472 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 TBCEQ15813 527 aaPredicted RBP10.3□□□□□ -0.76
SKA3-203ENST00000400018 ABLIM2Q6H8Q1 611 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 LUZP2Q86TE4 346 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 ZNF485Q8NCK3 441 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 AKR7LQ8NHP1 331 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms