RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 AKR7LQ8NHP1 331 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 VANGL1Q8TAA9 524 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 SLC26A7Q8TE54 656 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 RASSF5Q8WWW0 418 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ASB10Q8WXI3 467 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 NABP1Q96AH0 204 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 ZBTB9Q96C00 473 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 NMD3Q96D46 503 aaKnown RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 SAMD8Q96LT4 415 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 RBP7Q96R05 134 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 PRSS27Q9BQR3 290 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 CPPED1Q9BRF8 314 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 MRI1Q9BV20 369 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 OR2H1Q9GZK4 316 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 RABEP2Q9H5N1 569 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 UNKLQ9H9P5 680 aaKnown RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 NANOGQ9H9S0 305 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 MMP26Q9NRE1 261 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 MAN2C1Q9NTJ4 1040 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 RAB21Q9UL25 225 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 UGT2A1Q9Y4X1 527 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 INSIG2Q9Y5U4 225 aa7.38□□□□□ -1.23
CAPN3-208ENST00000397204 V9GYY5 206 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-208ENST00000397204 DNAJC9-AS1A6NH13 148 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 A8MXK9 166 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 IFNL4K9M1U5 179 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 SURF4O15260 269 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 OR7A10O76100 309 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 SLC2A10O95528 541 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 NGFP01138 241 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 TNFRSF1AP19438 455 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 TNFSF4P23510 183 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 AQP2P41181 271 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 MTNR1AP48039 350 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 TNFAIP6P98066 277 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 PAX8Q06710 450 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 PSG7Q13046 419 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 MTX3Q5HYI7 312 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 TMEM255AQ5JRV8 349 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 SLC25A47Q6Q0C1 308 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 C9orf139Q6ZV77 190 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 TSPYL5Q86VY4 417 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 BCL6BQ8N143 479 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 DPP10Q8N608 796 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF283Q8N7M2 679 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 ABHD4Q8TB40 342 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 SGTBQ96EQ0 304 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 C4orf45Q96LM5 186 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 FANCD2OSQ96PS1 177 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 DUX5Q96PT3 197 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 DCLRE1CQ96SD1 692 aaKnown RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 CGREF1Q99674 301 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 WACQ9BTA9 647 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 ALG12Q9BV10 488 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 C1QTNF5Q9BXJ0 243 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 POLR2J2Q9GZM3 115 aaKnown RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 MS4A7Q9GZW8 240 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 POLR2J3Q9H1A7 115 aaKnown RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 TXNIPQ9H3M7 391 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 KAT8Q9H7Z6 458 aaKnown RBP7.37□□□□□ -1.23
CAPN3-208ENST00000397204 MSL2Q9HCI7 577 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 TMEM106BQ9NUM4 274 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 IL19Q9UHD0 177 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 IL20RAQ9UHF4 553 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 NDUFAF1Q9Y375 327 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 MMP24Q9Y5R2 645 aa7.37□□□□□ -1.23
CAPN3-208ENST00000397204 A0A1B0GUS0 222 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 F5H0A9 414 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 TIMM8AO60220 97 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 OR5F1O95221 314 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 OPN1SWP03999 348 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 WNT2P09544 360 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 COX5BP10606 129 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 THRBP10828 461 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 GSTM3P21266 225 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 LAP3P28838 519 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 CD80P33681 288 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 PCGF2P35227 344 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 MDH2P40926 338 aaKnown RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 BTG1P62324 171 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 ERVK-25P63136 954 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 CD47Q08722 323 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 SLC9A3R2Q15599 337 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 ESCO2Q56NI9 601 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 SPRNQ5BIV9 151 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 C16orf87Q6PH81 154 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 LRRN1Q6UXK5 716 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 FOXL2NBQ6ZUU3 175 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 CCDC80Q76M96 950 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF771Q7L3S4 317 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 NKAIN4Q8IVV8 208 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 OR52E2Q8NGJ4 325 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 MOSPD2Q8NHP6 518 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 TSPEARQ8WU66 669 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 TMEM239Q8WW34 195 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 GEMIN6Q8WXD5 167 aaKnown RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 NSMAFQ92636 917 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 HDAC2Q92769 488 aaKnown RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 PTP4A1Q93096 173 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms