RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ATF6BQ99941 703 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 SEC22CQ9BRL7 303 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 PATZ1Q9HBE1 687 aaKnown RBP14.24□□□□□ -0.13
GNE-202ENST00000396594 FBXO8Q9NRD0 319 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 UBR3Q6ZT12 1888 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 TCRBP04435 133 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 ZNF136P52737 540 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 SYT9Q86SS6 491 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 M1APQ8TC57 530 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 Q96M85 177 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 FAM117AQ9C073 453 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 A0A1W2PQD3 144 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 UPK1AO00322 258 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 QDPRP09417 244 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 CNR1P21554 472 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 NKX6-1P78426 367 aaPredicted RBP14.24□□□□□ -0.13
GNE-202ENST00000396594 ZNF85Q03923 595 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 FAM162BQ5T6X4 162 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 TIGD3Q6B0B8 471 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 HEPHL1Q6MZM0 1159 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 TBPL2Q6SJ96 375 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 TMPRSS11FQ6ZWK6 438 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 PCDHGA5Q9Y5G8 931 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 LOC107986453A0A1B0GWG9 222 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 SNRPGP15A8MWD9 76 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 GMDSO60547 372 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 TFAP2AP05549 437 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 MYOGP15173 224 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 FUT6P51993 359 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 NXPH1P58417 271 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 SH2D5Q6ZV89 423 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 HAS2Q92819 552 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 COX14Q96I36 57 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 RNF170Q96K19 258 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 S1PR3Q99500 378 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 DHHO43323 396 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 MBTPS2O43462 519 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 TSPAN12O95859 305 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 CSF3P09919 207 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 MDH2P40926 338 aaKnown RBP14.23□□□□□ -0.13
GNE-202ENST00000396594 ELFN2Q5R3F8 820 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 CMTM4Q8IZR5 234 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 PLEKHA2Q9HB19 425 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 ZNF816-ZNF321PA0A0X1KG74 233 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 SLC22A20A6NK97 555 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 SERPINE3A8MV23 424 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 OR2F2O95006 317 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 NRASP01111 189 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 TNFRSF1AP19438 455 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 HTRA3P83110 453 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 OR2F1Q13607 317 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 RAB35Q15286 201 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 TERB2Q8NHR7 220 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 NUBPLQ8TB37 319 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 SLC39A7Q92504 469 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 DNAJA3Q96EY1 480 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 LOXL4Q96JB6 756 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 C21orf140B9A014 251 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 TNFSF15O95150 251 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 SLC17A1Q14916 467 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 SFRP5Q5T4F7 317 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 LINC00346Q8IVM7 164 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 ZDHHC23Q8IYP9 409 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 RBMXL3Q8N7X1 1067 aaKnown RBP14.23□□□□□ -0.13
GNE-202ENST00000396594 SLC38A9Q8NBW4 561 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 PLPP5Q8NEB5 264 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 MEN1O00255 615 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 RFXAPO00287 272 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 B4GAT1O43505 415 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 DNPH1O43598 174 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 SMIM21Q3B7S5 101 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 GLYATL3Q5SZD4 288 aa14.23□□□□□ -0.13
GNE-202ENST00000396594 ZNF845Q96IR2 970 aaPredicted RBP14.23□□□□□ -0.13
GNE-202ENST00000396594 TNFSF14O43557 240 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 AKR7A3O95154 331 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 SNRPBP14678 240 aaKnown RBP14.22□□□□□ -0.13
GNE-202ENST00000396594 EPHA8P29322 1005 aaPredicted RBP14.22□□□□□ -0.13
GNE-202ENST00000396594 IDH3GP51553 393 aaPredicted RBP14.22□□□□□ -0.13
GNE-202ENST00000396594 OR5M10Q6IEU7 315 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 WDR74Q6RFH5 385 aaPredicted RBP14.22□□□□□ -0.13
GNE-202ENST00000396594 S100PBPQ96BU1 408 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 R3HDMLQ9H3Y0 253 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 HRASLSQ9HDD0 168 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 A0A087WUJ7 227 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 ARPC3O15145 178 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 OR8U8P0C7N1 319 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 SHC1P29353 583 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 RPL18Q07020 188 aaKnown RBP14.22□□□□□ -0.13
GNE-202ENST00000396594 HLA-BQ31612 363 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 PRR18Q8N4B5 295 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 C10orf35Q96D05 121 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 CHRDL1Q9BU40 450 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 QSER1Q2KHR3 1735 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 ICOSLGO75144 302 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 SORBS2O94875 1100 aaKnown RBP14.22□□□□□ -0.13
GNE-202ENST00000396594 ATPAF1Q5TC12 328 aaPredicted RBP14.22□□□□□ -0.13
GNE-202ENST00000396594 LIPNQ5VXI9 398 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 ANGPTL5Q86XS5 388 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 ZNF683Q8IZ20 524 aa14.22□□□□□ -0.13
GNE-202ENST00000396594 OR6S1Q8NH40 331 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms