RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ING4Q9UNL4 249 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 MMACHCQ9Y4U1 282 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 HS3ST3B1Q9Y662 390 aa4.11□□□□□ -1.75
GABPB1-204ENST00000396464 KIAA0556O60303 1618 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 KIR2DS1A0A191URI9 304 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 OR2AT4A6NND4 320 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 F5H5T6 163 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 F5H768 121 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 K7EMT4 169 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 ERI3O43414 337 aaKnown RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 GATCO43716 136 aaKnown RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 UGT1A9O60656 530 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 SHOX2O60902 331 aaPredicted RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 BCAR3O75815 825 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 OR9G9P0C7N8 305 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 HIST1H1CP16403 213 aaKnown RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 IGFBP3P17936 291 aaPredicted RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 TBPP20226 339 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 CAV2P51636 162 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 RAP1GDS1P52306 607 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 GTF2A1P52655 376 aaPredicted RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 HCCSP53701 268 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 CLDN12P56749 244 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 ILF3Q12906 894 aaKnown RBP eCLIP4.1□□□□□ -1.753e-9■■■□□ 15.7
GABPB1-204ENST00000396464 ELAVL2Q12926 359 aaKnown RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 UNC119Q13432 240 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 KIR2DS1Q14954 304 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 TRIP6Q15654 476 aaKnown RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 POU2AF1Q16633 256 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 ACER2Q5QJU3 275 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 IRAK1BP1Q5VVH5 260 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 C8orf82Q6P1X6 216 aaPredicted RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 DNM1P34Q6PK57 102 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 CCDC121Q6ZUS5 278 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 NAXDQ8IW45 347 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 C10orf67Q8IYJ2 551 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF441Q8N8Z8 693 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 OR6Q1Q8NGQ2 317 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 ZNRF4Q8WWF5 429 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 C22orf15Q8WYQ4 148 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 DNASE2BQ8WZ79 361 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 NTAN1Q96AB6 310 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 POM121L2Q96KW2 1035 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF681Q96N22 645 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 SCGB3A2Q96PL1 93 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 HCAR1Q9BXC0 346 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 HES7Q9BYE0 225 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 PRSS22Q9GZN4 317 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 MFSD1Q9H3U5 465 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 Q9UF83 564 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 OPN4Q9UHM6 478 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 ZNF107Q9UII5 783 aaPredicted RBP4.1□□□□□ -1.75
GABPB1-204ENST00000396464 GNPTGQ9UJJ9 305 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 CPQQ9Y646 472 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 CACNG2Q9Y698 323 aa4.1□□□□□ -1.75
GABPB1-204ENST00000396464 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.09□□□□□ -1.75
GABPB1-204ENST00000396464 IGHV4-61A0A0C4DH41 118 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 H3BNH8 94 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 DFFAO00273 331 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 ACOT8O14734 319 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 ACOX3O15254 700 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 TNFSF12O43508 249 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 TYROBPO43914 113 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 ATP6V1G2O95670 118 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 RAB36O95755 333 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 IGHV4-59P01825 116 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 HLA-AP01891 365 aaKnown RBP4.09□□□□□ -1.75
GABPB1-204ENST00000396464 CALB1P05937 261 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 CDK1P06493 297 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 HOXC4P09017 264 aaPredicted RBP4.09□□□□□ -1.75
GABPB1-204ENST00000396464 GNAO1P09471 354 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 ME2P23368 584 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 ALDH3A1P30838 453 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 CEACAM8P31997 349 aaPredicted RBP4.09□□□□□ -1.75
GABPB1-204ENST00000396464 TGFBR2P37173 567 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 DCTP40126 519 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 RFX2P48378 723 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 AQP5P55064 265 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 TRAF2Q12933 501 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 GUSBP1Q15486 140 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 TAB1Q15750 504 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 CYP51A1Q16850 503 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 ACSM3Q53FZ2 586 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 PWWP2BQ6NUJ5 590 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 CASP12Q6UXS9 341 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 ACOT7LQ6ZUV0 252 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 S100A7AQ86SG5 101 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 MRPL52Q86TS9 123 aaKnown RBP4.09□□□□□ -1.75
GABPB1-204ENST00000396464 TRAPPC5Q8IUR0 188 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 PIANPQ8IYJ0 282 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 PRSS58Q8IYP2 241 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 PRR22Q8IZ63 422 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 STPG2Q8N412 459 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 RIBC1Q8N443 379 aaPredicted RBP4.09□□□□□ -1.75
GABPB1-204ENST00000396464 SUMF1Q8NBK3 374 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 PRSS33Q8NF86 280 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 OR56B4Q8NH76 319 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 OR2T6Q8NHC8 308 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 RFESDQ8TAC1 157 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms