RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 DUX4L6P0CJ89 424 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DUX4L7P0CJ90 424 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF20P17024 532 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 PDHA2P29803 388 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 CSNK1DP48730 415 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 TGM4P49221 684 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 RPL14P50914 215 aaKnown RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 MFAP2P55001 183 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 TLE4Q04727 773 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 GGTLC2Q14390 218 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 CASP8Q14790 479 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 CCDC6Q16204 474 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 PSMD5Q16401 504 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DNAL1Q4LDG9 190 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF658Q5TYW1 1059 aaPredicted RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 FAM219BQ5XKK7 198 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 ARMCX5Q6P1M9 558 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DUX4L9Q6RFH8 374 aaPredicted RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 FRRS1Q6ZNA5 592 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 METTL27Q8N6F8 245 aaPredicted RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 NANOGP1Q8N7R0 232 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 ACOT4Q8N9L9 421 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 PRSS33Q8NF86 280 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 OR2G2Q8NGZ5 317 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 CXorf40AQ8TE69 158 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DNAJB3Q8WWF6 145 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 TRIM51Q9BSJ1 452 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 COPS4Q9BT78 406 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 PRO3102Q9H379 93 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 LIME1Q9H400 295 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 THYN1Q9P016 225 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DUX4Q9UBX2 424 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 SLC2A6Q9UGQ3 507 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 SAMD4AQ9UPU9 718 aaKnown RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 L3MBTL1Q9Y468 752 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 A0A087X1B8 175 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 A0A0A6YYD5 115 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 GLYATL1P3A0A0U1RQE8 302 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 LOC100131303A0A0U1RQF7 123 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 GOLGA8JA6NMD2 632 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 GOLGA8KD6RF30 607 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 GOLGA8MH3BSY2 632 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 SULT1C2O00338 296 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 NSA2O95478 260 aaKnown RBP5.29□□□□□ -1.56
TRAV35-201ENST00000390462 OXTP01178 125 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 RETP07949 1114 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 CD55P08174 381 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 GOLGA8HP0CJ92 632 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 SLC35E2P0CK97 266 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 DAOP14920 347 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 SELEP16581 610 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 PSMB5P28074 263 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 PDLIM4P50479 330 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ACTBP60709 375 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ERVK-16P61578 105 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 STXBP1P61764 594 aaKnown RBP5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ACTA2P62736 377 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 RPL10AP62906 217 aaKnown RBP5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ACTG1P63261 375 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ACTG2P63267 376 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ACTC1P68032 377 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ACTA1P68133 377 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 BNIP2Q12982 314 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 MTF1Q14872 753 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 TAL2Q16559 108 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 SMUG1Q53HV7 270 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 MS4A13Q5J8X5 152 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 IDNKQ5T6J7 187 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 MEDAGQ5VYS4 303 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 TRIM40Q6P9F5 258 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 TTC33Q6PID6 262 aaPredicted RBP5.29□□□□□ -1.56
TRAV35-201ENST00000390462 AHSA2Q719I0 299 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 SSX7Q7RTT5 188 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 PIM3Q86V86 326 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF786Q8N393 782 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 SUMF1Q8NBK3 374 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF740Q8NDX6 193 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 VN1R2Q8NFZ6 395 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 OR56B4Q8NH76 319 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 NDRG1Q92597 394 aaKnown RBP5.29□□□□□ -1.56
TRAV35-201ENST00000390462 CMTM7Q96FZ5 175 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF354BQ96LW1 612 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 SORCS2Q96PQ0 1159 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 TMEM38AQ9H6F2 299 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 EXOSC3Q9NQT5 275 aaKnown RBP5.29□□□□□ -1.56
TRAV35-201ENST00000390462 IL37Q9NZH6 218 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 VAPAQ9P0L0 249 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 FBXO7Q9Y3I1 522 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 AUP1Q9Y679 476 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 CSNK1G3Q9Y6M4 447 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 EYSQ5T1H1 3165 aa5.29□□□□□ -1.56
TRAV35-201ENST00000390462 HACD1B0YJ81 288 aa5.28□□□□□ -1.56
TRAV35-201ENST00000390462 TIMP1P01033 207 aa5.28□□□□□ -1.56
TRAV35-201ENST00000390462 CATP04040 527 aaKnown RBP5.28□□□□□ -1.56
TRAV35-201ENST00000390462 HSD17B1P14061 328 aa5.28□□□□□ -1.56
TRAV35-201ENST00000390462 SLC2A5P22732 501 aa5.28□□□□□ -1.56
TRAV35-201ENST00000390462 PROZP22891 400 aa5.28□□□□□ -1.56
TRAV35-201ENST00000390462 DCTP40126 519 aa5.28□□□□□ -1.56
TRAV35-201ENST00000390462 CEBPGP53567 150 aa5.28□□□□□ -1.56
TRAV35-201ENST00000390462 PAX9P55771 341 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms