RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 EPHA1P21709 976 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 TBXA2RP21731 343 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 CCNOP22674 350 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 TMEM31Q5JXX7 168 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 LYG2Q86SG7 212 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 GAS2L1Q99501 681 aaPredicted RBP12.97□□□□□ -0.33
RTF1-201ENST00000389629 PCDHGA5Q9Y5G8 931 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 HCFC2Q9Y5Z7 792 aa12.97□□□□□ -0.33
RTF1-201ENST00000389629 ZNF264O43296 627 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 ITGB2P05107 769 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 RAB38P57729 211 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 RSU1Q15404 277 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 FAM209BQ5JX69 171 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 DMKNQ6E0U4 476 aaPredicted RBP12.96□□□□□ -0.33
RTF1-201ENST00000389629 TCEAL6Q6IPX3 200 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 KIRREL2Q6UWL6 708 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 CLEC9AQ6UXN8 241 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 TMPRSS11FQ6ZWK6 438 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 ANGPTL5Q86XS5 388 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 FAM181AQ8N9Y4 354 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 NUBPLQ8TB37 319 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 ISOC2Q96AB3 205 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 NUDT22Q9BRQ3 303 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 LRIT1Q9P2V4 623 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 OR6C68A6NDL8 312 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 OR5K4A6NMS3 321 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 ICAM2P13598 275 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 ALOX5APP20292 161 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 SLC22A25Q6T423 547 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 OVCH2Q7RTZ1 564 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 OR11G2Q8NGC1 345 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 OR6K3Q8NGY3 331 aa12.96□□□□□ -0.33
RTF1-201ENST00000389629 OR6C76A6NM76 312 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 SLC35E2P0CK97 266 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 CASRP41180 1078 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 UBXN2BQ14CS0 331 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 PWWP2BQ6NUJ5 590 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 FBXW12Q6X9E4 464 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 MRPL41Q8IXM3 137 aaKnown RBP12.96□□□□□ -0.34
RTF1-201ENST00000389629 OR9K2Q8NGE7 335 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 OCSTAMPQ9BR26 566 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 NXF5Q9H1B4 397 aaKnown RBP12.96□□□□□ -0.34
RTF1-201ENST00000389629 METTL7AQ9H8H3 244 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 KCNG2Q9UJ96 466 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 MGAMO43451 1857 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 ZNF41P51814 821 aaPredicted RBP12.96□□□□□ -0.34
RTF1-201ENST00000389629 ZP2Q05996 745 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 DOC2BQ14184 412 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 NSDHLQ15738 373 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 GUCA2BQ16661 112 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 DMRTC1Q5HYR2 192 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 DCAF12L2Q5VW00 463 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 RGS7BPQ6MZT1 257 aaPredicted RBP12.96□□□□□ -0.34
RTF1-201ENST00000389629 USP53Q70EK8 1073 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 FAM24BQ8N5W8 94 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 CHST6Q9GZX3 395 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.34
RTF1-201ENST00000389629 RPA2P15927 270 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 HNF4GQ14541 408 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 MRM1Q6IN84 353 aaKnown RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 MED25Q71SY5 747 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 AVL9Q8NBF6 648 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 PDE7BQ9NP56 450 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 ZNF230Q9UIE0 474 aaPredicted RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 RAB22AQ9UL26 194 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 LY86O95711 162 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 HLA-DQB1P01920 261 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 SLC2A1P11166 492 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 HNRNPA2B1P22626 353 aaKnown RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 RAP1AP62834 184 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 POU3F1Q03052 451 aaPredicted RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 SLC43A2Q8N370 569 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 OR51Q1Q8NH59 317 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 OR10A5Q9H207 317 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 TUBG2Q9NRH3 451 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 C1orf123Q9NWV4 160 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 MRPS28Q9Y2Q9 187 aaKnown RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 SLC22A7Q9Y694 548 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 TMIGD3P0DMS9 266 aaPredicted RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 DAOP14920 347 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 GNB3P16520 340 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 BLVRBP30043 206 aaPredicted RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 ZNF93P35789 620 aaPredicted RBP12.95□□□□□ -0.34
RTF1-201ENST00000389629 DUSP2Q05923 314 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 PJVKQ0ZLH3 352 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 Q6ZSR6 202 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 ZNF695Q8IW36 515 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 OR6S1Q8NH40 331 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 HIST1H2AAQ96QV6 131 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 MMP24Q9Y5R2 645 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 CACNA1IQ9P0X4 2223 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 CYTIPO60759 359 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 PPP1R1AQ13522 171 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 CD200R1LQ6Q8B3 271 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 SUMF1Q8NBK3 374 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 FAM3CQ92520 227 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 NICN1Q9BSH3 213 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 KIR3DX1Q9H7L2 352 aa12.95□□□□□ -0.34
RTF1-201ENST00000389629 ZNF346Q9UL40 294 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms