RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 HES5Q5TA89 166 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 ZNF704Q6ZNC4 412 aaPredicted RBP22.37■■□□□ 1.17
SHOX2-201ENST00000389589 GGNQ86UU5 652 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 OR2M7Q8NG81 312 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 LGALS14Q8TCE9 139 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 TMEM54Q969K7 222 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 PNPLA2Q96AD5 504 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 INTS12Q96CB8 462 aaKnown RBP22.37■■□□□ 1.17
SHOX2-201ENST00000389589 OR2M2Q96R28 347 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 SRXN1Q9BYN0 137 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 G6PC2Q9NQR9 355 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 OR52A1Q9UKL2 312 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 FBXL3Q9UKT7 428 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 DHDHQ9UQ10 334 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 CNTRLQ7Z7A1 2325 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 A0A0B4J203 849 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 SPAARA0A1B0GVQ0 90 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 TMEM269A0A1B0GVZ9 245 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 PINLYPA6NC86 204 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 EIF1AYO14602 144 aaKnown RBP22.37■■□□□ 1.17
SHOX2-201ENST00000389589 CALCBP10092 127 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 ENPP1P22413 925 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 ZNF133P52736 654 aaPredicted RBP22.37■■□□□ 1.17
SHOX2-201ENST00000389589 MFAP5Q13361 173 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 WIPI1Q5MNZ9 446 aaPredicted RBP22.37■■□□□ 1.17
SHOX2-201ENST00000389589 KLHL24Q6TFL4 600 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 DTX1Q86Y01 620 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 OR6N1Q8NGY5 312 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 NEURL2Q9BR09 285 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 WACQ9BTA9 647 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 B4GALT7Q9UBV7 327 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 GDF2Q9UK05 429 aaPredicted RBP22.37■■□□□ 1.17
SHOX2-201ENST00000389589 LHFPL6Q9Y693 200 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 LINC00854A0A1B0GVQ3 168 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 ANXA2P2A6NMY6 339 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 CD2P06729 351 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 ANXA2P07355 339 aaKnown RBP22.36■■□□□ 1.17
SHOX2-201ENST00000389589 ADRA2CP18825 462 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 INPP1P49441 399 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 CLDN20P56880 219 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 OR1C1Q15619 314 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 C10orf128Q5T292 105 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 SIGLEC12Q96PQ1 595 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 EMC7Q9NPA0 242 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 HHLA2Q9UM44 414 aa22.36■■□□□ 1.17
SHOX2-201ENST00000389589 PCDHGA9Q9Y5G4 932 aaKnown RBP22.36■■□□□ 1.17
SHOX2-201ENST00000389589 ACHEP22303 614 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 PITPNAQ00169 270 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 C11orf54Q9H0W9 315 aaPredicted RBP22.35■■□□□ 1.17
SHOX2-201ENST00000389589 TRAV8-7A0A075B6U6 113 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 CDRT15L2A8MXV6 281 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 SMAD9O15198 467 aaKnown RBP22.35■■□□□ 1.17
SHOX2-201ENST00000389589 PLA2G10O15496 165 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 SSX4O60224 188 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 UBL3O95164 117 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 UBCP0CG48 685 aaKnown RBP22.35■■□□□ 1.17
SHOX2-201ENST00000389589 CDAP32320 146 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 GUCA1AP43080 201 aaPredicted RBP22.35■■□□□ 1.17
SHOX2-201ENST00000389589 TMEM244Q5VVB8 128 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 TMEM123Q8N131 208 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 OR2V1Q8NHB1 315 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 PPP1R14AQ96A00 147 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 ZNF385AQ96PM9 386 aaKnown RBP22.35■■□□□ 1.17
SHOX2-201ENST00000389589 NIPAL2Q9H841 368 aa22.35■■□□□ 1.17
SHOX2-201ENST00000389589 MED13Q9UHV7 2174 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 WDPCPO95876 746 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 POU3F2P20265 443 aaPredicted RBP22.34■■□□□ 1.17
SHOX2-201ENST00000389589 EIF1AXP47813 144 aaKnown RBP22.34■■□□□ 1.17
SHOX2-201ENST00000389589 SUCLG1P53597 346 aaKnown RBP22.34■■□□□ 1.17
SHOX2-201ENST00000389589 BCL2L15Q5TBC7 163 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 MZT2BQ6NZ67 158 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 ASB5Q8WWX0 329 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 ADGRG7Q96K78 797 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 LIN7BQ9HAP6 207 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 CAMK2AQ9UQM7 478 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 TTLL8A6PVC2 850 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 ZNF878C9JN71 531 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 MAS1P04201 325 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 PRKAR1AP10644 381 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 GFRA1P56159 465 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 SCAND1P57086 179 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 LSM6P62312 80 aaKnown RBP22.34■■□□□ 1.17
SHOX2-201ENST00000389589 HACD4Q5VWC8 232 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 OR10S1Q8NGN2 331 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 CKLFQ9UBR5 152 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 FOXJ3Q9UPW0 622 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 ETV7Q9Y603 341 aa22.34■■□□□ 1.17
SHOX2-201ENST00000389589 H0YC42 278 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 CFPP27918 469 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 PDSS1Q5T2R2 415 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 CFAP77Q6ZQR2 320 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 LINC00696Q6ZRV3 163 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 ZIC4Q8N9L1 334 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 RFT1Q96AA3 541 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 PRRX2Q99811 253 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 FAM206AQ9NX38 181 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 CLEC4AQ9UMR7 237 aa22.33■■□□□ 1.17
SHOX2-201ENST00000389589 H3BSH0 61 aa22.32■■□□□ 1.16
SHOX2-201ENST00000389589 FOXL2NBQ6ZUU3 175 aa22.32■■□□□ 1.16
SHOX2-201ENST00000389589 PRSS33Q8NF86 280 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms