RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CT45A9P0DMV2 189 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 IGFBP6P24592 240 aaPredicted RBP12.79□□□□□ -0.36
SNPH-201ENST00000381867 DUSP1P28562 367 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CHRNB4P30926 498 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 PFN3P60673 137 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 UBE2IP63279 158 aaKnown RBP12.79□□□□□ -0.36
SNPH-201ENST00000381867 CT45A2Q5DJT8 189 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CT45A1Q5HYN5 189 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CT45A3Q8NHU0 189 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 TMED6Q8WW62 240 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CGGBP1Q9UFW8 167 aaPredicted RBP12.79□□□□□ -0.36
SNPH-201ENST00000381867 PPT2Q9UMR5 302 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CHST2Q9Y4C5 530 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 HCRTR1O43613 425 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 PRAMEF4O60810 478 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CSF3P09919 207 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 MTHFD2P13995 350 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 MAP2K6P52564 334 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 ANGPTL5Q86XS5 388 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 SEH1LQ96EE3 360 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 TRBV5-4A0A0C4DH59 114 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 HMX2A2RU54 273 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 FZD6O60353 706 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
SNPH-201ENST00000381867 SLC19A1P41440 591 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 AANATQ16613 207 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 OR1M1Q8NGA1 313 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 WBP2Q969T9 261 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 PARP12Q9H0J9 701 aaKnown RBP12.79□□□□□ -0.36
SNPH-201ENST00000381867 ACOXLQ9NUZ1 547 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
SNPH-201ENST00000381867 TMEM184BQ9Y519 407 aaPredicted RBP12.79□□□□□ -0.36
SNPH-201ENST00000381867 ZAR1LA6NP61 321 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 H0Y8G0 127 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 MRPL19P49406 292 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 DCDP81605 110 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 LTC4SQ16873 150 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 AAED1Q7RTV5 226 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 LINC00615Q96LM1 132 aaPredicted RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 ZNF768Q9H5H4 540 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 NDRG3Q9UGV2 375 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 A0A1B0GUH1 482 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 DCTN6O00399 190 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 PRKRAO75569 313 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 NKX2-1P43699 371 aaPredicted RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 MAT1AQ00266 395 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 C9orf135Q5VTT2 229 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 GABRG1Q8N1C3 465 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 TMEM99Q8N816 258 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 ZNF740Q8NDX6 193 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 PFN4Q8NHR9 129 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 MED9Q9NWA0 146 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 FITM1A5D6W6 292 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 PGFP49763 221 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 VRK3Q8IV63 474 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 INTS12Q96CB8 462 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 FER1L6-AS2Q96M78 137 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 SNRPGP15A8MWD9 76 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 ZNF587BE7ETH6 402 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 ANGPTL7O43827 346 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 NXPH3O95157 252 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 GRB2P62993 217 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 Q6ZRG5 221 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 MED25Q71SY5 747 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 OR1J2Q8NGS2 313 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 OR8U1Q8NH10 309 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 GNPNAT1Q96EK6 184 aaPredicted RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 LCORQ96JN0 433 aaPredicted RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 ATP13A2Q9NQ11 1180 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 ZNF331Q9NQX6 463 aaPredicted RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 CHRNA9Q9UGM1 479 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 TCRBV5S2A0A599 114 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 OR5K3A6NET4 321 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 LINC01565O15544 149 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 ADRA2CP18825 462 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 PSMB6P28072 239 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 EVX1P49640 407 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 PIGTQ969N2 578 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 MRGPRX1Q96LB2 322 aa12.78□□□□□ -0.36
SNPH-201ENST00000381867 YBX2Q9Y2T7 364 aaKnown RBP12.78□□□□□ -0.36
SNPH-201ENST00000381867 MYO9BQ13459 2157 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 A0A1W2PPC4 97 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 AKR7A2O43488 359 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 TRAF3IP2O43734 574 aaPredicted RBP12.77□□□□□ -0.36
SNPH-201ENST00000381867 GLSO94925 669 aaPredicted RBP12.77□□□□□ -0.36
SNPH-201ENST00000381867 OR8U8P0C7N1 319 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 SLC35E2P0CK97 266 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 CD1EP15812 388 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 ELLP55199 621 aaPredicted RBP12.77□□□□□ -0.36
SNPH-201ENST00000381867 TMEM71Q6P5X7 295 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 TMEM207Q6UWW9 146 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 LINC00696Q6ZRV3 163 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 CATSPERDQ86XM0 798 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 RBM45Q8IUH3 476 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms