RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 LINC00346Q8IVM7 164 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 SMIM4Q8WVI0 70 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 TSEN15Q8WW01 171 aaKnown RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 FAM122AQ96E09 287 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 MARVELD1Q9BSK0 173 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 HDHD2Q9H0R4 259 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 FBXL3Q9UKT7 428 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 PHF3Q92576 2039 aaKnown RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 A0A1B0GVC2 190 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 A6NIN4 97 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 ANXA2P2A6NMY6 339 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 GJE1A6NN92 205 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 EEF1E1O43324 174 aaKnown RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 ANXA2P07355 339 aaKnown RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 IGFBP3P17936 291 aaPredicted RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 KLK2P20151 261 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 SLC6A1P30531 599 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 AGFG1P52594 562 aaKnown RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 TRIP6Q15654 476 aaKnown RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 SLC36A2Q495M3 483 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 ZNF57Q68EA5 555 aaPredicted RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 ZNF704Q6ZNC4 412 aaPredicted RBP17.1■□□□□ 0.33
GMDS-201ENST00000380805 C1orf198Q9H425 327 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 PLEKHA1Q9HB21 404 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 OR52A1Q9UKL2 312 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 DHDHQ9UQ10 334 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 NCKAP5O14513 1909 aa17.1■□□□□ 0.33
GMDS-201ENST00000380805 A0A0B4J293 547 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 FAM240BA0A1B0GVZ2 78 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 LRRC3CA6NJW4 275 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 G3V3Y1 287 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 SULT1B1O43704 296 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 ADRB1P08588 477 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 UBCP0CG48 685 aaKnown RBP17.09■□□□□ 0.33
GMDS-201ENST00000380805 DNASE1L1P49184 302 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 EIF2B2P49770 351 aaKnown RBP17.09■□□□□ 0.33
GMDS-201ENST00000380805 GPR176Q14439 515 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 FAM166AQ6J272 317 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 FOXL2NBQ6ZUU3 175 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 FCRLAQ7L513 359 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 OR10S1Q8NGN2 331 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 ADAMTS17Q8TE56 1095 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 KCNE4Q8WWG9 221 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 PPP1R14AQ96A00 147 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 HAVCR1Q96D42 359 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 SLAMF6Q96DU3 332 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 NAA11Q9BSU3 229 aaPredicted RBP17.09■□□□□ 0.33
GMDS-201ENST00000380805 FAM206AQ9NX38 181 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 STEAP1Q9UHE8 339 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 HHLA2Q9UM44 414 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 EMC9Q9Y3B6 208 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 LHFPL6Q9Y693 200 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 PIEZO1Q92508 2521 aa17.09■□□□□ 0.33
GMDS-201ENST00000380805 A0A0G2JMM0 328 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 A0A1W2PPB8 328 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 A0A1W2PRS3 328 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 ZNF726A6NNF4 738 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 KIR3DP1A8MWS1 328 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 TFECO14948 347 aaPredicted RBP17.08■□□□□ 0.32
GMDS-201ENST00000380805 TLX3O43711 291 aaPredicted RBP17.08■□□□□ 0.32
GMDS-201ENST00000380805 CD2P06729 351 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 H2BFMP0C1H6 154 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 DLSTP36957 453 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 PLA2G5P39877 138 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 CARTPTQ16568 116 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 RSPO4Q2I0M5 234 aaPredicted RBP17.08■□□□□ 0.32
GMDS-201ENST00000380805 ODF4Q2M2E3 257 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 PLA1AQ53H76 456 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 C10orf128Q5T292 105 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 TMEM244Q5VVB8 128 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 ESPNLQ6ZVH7 1005 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 CREB3L2Q70SY1 520 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 TMPRSS12Q86WS5 348 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 DTX3Q8N9I9 347 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 TMEM54Q969K7 222 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 C7orf50Q9BRJ6 194 aaKnown RBP17.08■□□□□ 0.32
GMDS-201ENST00000380805 CLEC4AQ9UMR7 237 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 CACNG2Q9Y698 323 aa17.08■□□□□ 0.32
GMDS-201ENST00000380805 CNOT1A5YKK6 2376 aaKnown RBP17.08■□□□□ 0.32
GMDS-201ENST00000380805 TMEM269A0A1B0GVZ9 245 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 HMX3A6NHT5 357 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 MAS1P04201 325 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 HLA-DMAP28067 261 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 BTCP35070 178 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 CYB561P49447 251 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 SUCLG1P53597 346 aaKnown RBP17.07■□□□□ 0.32
GMDS-201ENST00000380805 DGCR2P98153 550 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 MFAP5Q13361 173 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 LRFN4Q6PJG9 635 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 CORO6Q6QEF8 472 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 GLRX5Q86SX6 157 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 BEST3Q8N1M1 668 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 UBE2J2Q8N2K1 259 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 DNAAF1Q8NEP3 725 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 OR6F1Q8NGZ6 308 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 CREB3L1Q96BA8 519 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 UPRTQ96BW1 309 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 JSRP1Q96MG2 331 aaPredicted RBP17.07■□□□□ 0.32
GMDS-201ENST00000380805 NIPAL2Q9H841 368 aa17.07■□□□□ 0.32
GMDS-201ENST00000380805 GDF2Q9UK05 429 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms